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Report for CCDS6076.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6076.1 Public Homo sapiens 8 DCTN6 24 110 108 CCDS HistoryNCBI Gene:10671Re-query CCDS DB by CCDS ID:6076.1Re-query CCDS DB by GeneID:10671See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6076.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000221114.8 ENSP00000221114.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000221114.8Link to Ensembl Protein Viewer:ENSP00000221114.3Re-query CCDS DB by Nucleotide ID:ENST00000221114Re-query CCDS DB by Protein ID:ENSP00000221114
Original member Current member NCBI NM_006571.4 NP_006562.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006571.4Link to Protein Sequence:NP_006562.1Re-query CCDS DB by Nucleotide ID:NM_006571Re-query CCDS DB by Protein ID:NP_006562Link to BLAST:NP_006562.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006562.1 190 O00399 190 100% 0 0

Chromosomal Locations for CCDS 6076.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 30156384 30156406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30164111 30164175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30175085 30175190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30177126 30177214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30179408 30179455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30180488 30180630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30183075 30183173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (573 nt):
ATGGCGGAGAAGACTCAAAAGAGTGTGAAGATTGCTCCTGGAGCAGTTGTATGTGTAGAAAGTGAAATCA
GAGGAGATGTAACTATCGGACCTCGGACAGTGATCCACCCTAAAGCAAGAATTATTGCGGAAGCCGGGCC
AATAGTGATTGGCGAAGGGAACCTAATAGAAGAACAGGCCCTTATCATAAATGCTTACCCAGATAATATC
ACTCCTGACACTGAAGATCCAGAACCAAAACCTATGATCATTGGCACCAATAATGTGTTTGAAGTTGGCT
GTTATTCCCAAGCCATGAAGATGGGAGATAATAATGTCATTGAATCAAAAGCATATGTAGGCAGAAATGT
AATATTGACAAGTGGCTGCATCATTGGGGCTTGTTGCAACCTAAATACATTTGAAGTCATCCCTGAGAAT
ACGGTGATCTATGGTGCAGACTGCCTTCGTCGGGTGCAGACTGAGCGACCGCAGCCCCAGACACTACAGC
TGGATTTCTTGATGAAAATCTTGCCAAATTACCACCACCTAAAGAAGACTATGAAAGGAAGCTCAACTCC
AGTAAAGAACTAA

Translation (190 aa):
MAEKTQKSVKIAPGAVVCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNI
TPDTEDPEPKPMIIGTNNVFEVGCYSQAMKMGDNNVIESKAYVGRNVILTSGCIIGACCNLNTFEVIPEN
TVIYGADCLRRVQTERPQPQTLQLDFLMKILPNYHHLKKTMKGSSTPVKN


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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