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Report for CCDS5693.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5693.1 Public Homo sapiens 7 MEPCE 24 110 108 CCDS HistoryNCBI Gene:56257Re-query CCDS DB by CCDS ID:5693.1Re-query CCDS DB by GeneID:56257See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5693.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310512.4 ENSP00000308546.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000310512.4Link to Ensembl Protein Viewer:ENSP00000308546.2Re-query CCDS DB by Nucleotide ID:ENST00000310512Re-query CCDS DB by Protein ID:ENSP00000308546
Original member Current member NCBI NM_019606.6 NP_062552.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019606.6Link to Protein Sequence:NP_062552.2Re-query CCDS DB by Nucleotide ID:NM_019606Re-query CCDS DB by Protein ID:NP_062552Link to BLAST:NP_062552.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062552.2 689 Q7L2J0-1 689 100% 0 0

Chromosomal Locations for CCDS 5693.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100430019 100431689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100432919 100433137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100433263 100433389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100433502 100433554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2070 nt):
ATGATCGAGATGGCGGCGGAGAAGGAGCCGTTTCTGGTGCCGGCCCCGCCGCCGCCGCTCAAAGATGAGT
CGGGCGGAGGGGGCGGCCCCACGGTGCCACCGCACCAAGAGGCCGCCTCTGGGGAGCTCCGCGGCGGGAC
GGAGCGTGGTCCGGGTCGTTGCGCGCCATCTGCGGGGTCCCCAGCCGCTGCGGTCGGTCGGGAAAGCCCC
GGGGCCGCGGCCACCTCCTCCAGTGGTCCCCAGGCGCAGCAGCACCGAGGGGGCGGCCCCCAGGCGCAGT
CGCATGGGGAGGCCCGCCTGTCGGATCCCCCGGGGCGAGCCGCTCCCCCGGACGTGGGGGAGGAGCGCCG
GGGAGGGGGCGGGACAGAGCTGGGTCCCCCTGCTCCTCCTCGACCCCGCAATGGCTATCAGCCCCACCGG
CCACCTGGGGGGGGCGGGGGCAAGAGGAGAAATAGCTGTAATGTAGGGGGAGGCGGGGGAGGCTTCAAAC
ATCCGGCCTTCAAGAGGCGCAGGCGGGTGAATTCGGACTGTGACTCTGTGTTACCCTCCAACTTCCTCCT
GGGGGGCAATATCTTTGATCCCCTGAACCTGAATAGCCTCCTGGATGAGGAAGTGAGCCGCACTCTCAAC
GCGGAGACCCCTAAGTCATCCCCCCTTCCGGCCAAAGGGCGAGATCCGGTGGAGATCCTCATCCCCAAAG
ATATTACTGACCCGCTCAGTCTCAATACTTGCACTGATGAGGGCCATGTAGTTCTTGCTTCGCCACTCAA
GACTGGTCGGAAGCGGCATAGACACCGGGGACAGCACCACCAGCAGCAGCAGGCAGCCGGAGGGAGTGAG
AGTCACCCCGTGCCGCCCACAGCCCCTCTCACCCCCTTACTCCACGGGGAGGGCGCCTCACAGCAGCCGC
GGCACAGGGGCCAGAACCGGGATGCCCCCCAACCCTATGAACTCAACACAGCCATCAACTGCAGGGATGA
AGTGGTGTCTCCCCTTCCATCTGCTCTGCAGGGTCCCTCAGGCTCCCTATCAGCCCCTCCAGCTGCCTCA
GTTATCTCTGCACCCCCATCTTCCTCCTCCCGACATCGCAAACGTCGCAGGACTTCCAGCAAGTCGGAGG
CAGGGGCTAGGGGTGGAGGCCAGGGTTCCAAGGAAAAGGGCCGAGGGAGTTGGGGAGGCCGCCACCACCA
CCACCACCCACTGCCTGCAGCAGGCTTCAAAAAGCAACAGCGCAAGTTCCAGTATGGGAATTATTGCAAA
TACTATGGGTACCGCAATCCTTCCTGTGAGGATGGGCGCCTTCGGGTGTTGAAGCCTGAGTGGTTTCGGG
GCCGGGACGTCCTAGATCTGGGCTGCAATGTGGGCCATCTGACCCTGAGCATTGCCTGCAAGTGGGGCCC
GTCCCGCATGGTGGGCCTGGATATCGATTCCCGGCTCATCCATTCTGCCCGCCAAAACATCCGACACTAC
CTTTCCGAGGAGCTGCGTCTCCCACCCCAGACTTTGGAAGGGGACCCGGGGGCAGAGGGTGAGGAAGGGA
CCACCACCGTTCGAAAGAGGAGCTGCTTCCCAGCCTCGCTGACTGCCAGCCGGGGTCCCATCGCTGCCCC
CCAAGTGCCCTTGGATGGAGCGGACACATCAGTCTTCCCCAACAATGTTGTCTTCGTCACGGGTAATTAT
GTGCTGGATCGAGATGACCTGGTGGAGGCCCAAACACCTGAGTATGATGTGGTGCTCTGCCTCAGCCTCA
CCAAGTGGGTGCATCTGAACTGGGGAGACGAGGGCCTGAAGCGCATGTTTCGCCGGATCTACCGGCACCT
ACGCCCTGGGGGCATCCTGGTCCTAGAGCCCCAACCCTGGTCGTCGTATGGCAAGAGAAAGACTCTTACA
GAAACGATCTACAAGAACTACTACCGAATCCAATTGAAGCCAGAGCAGTTCAGTTCCTACCTGACATCCC
CAGACGTGGGCTTCTCCAGCTATGAGCTTGTGGCCACACCCCACAACACCTCTAAAGGCTTCCAGCGTCC
TGTGTACCTGTTCCACAAGGCCCGATCCCCCAGCCACTAA

Translation (689 aa):
MIEMAAEKEPFLVPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESP
GAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPRNGYQPHR
PPGGGGGKRRNSCNVGGGGGGFKHPAFKRRRRVNSDCDSVLPSNFLLGGNIFDPLNLNSLLDEEVSRTLN
AETPKSSPLPAKGRDPVEILIPKDITDPLSLNTCTDEGHVVLASPLKTGRKRHRHRGQHHQQQQAAGGSE
SHPVPPTAPLTPLLHGEGASQQPRHRGQNRDAPQPYELNTAINCRDEVVSPLPSALQGPSGSLSAPPAAS
VISAPPSSSSRHRKRRRTSSKSEAGARGGGQGSKEKGRGSWGGRHHHHHPLPAAGFKKQQRKFQYGNYCK
YYGYRNPSCEDGRLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHY
LSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNY
VLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKRKTLT
ETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVATPHNTSKGFQRPVYLFHKARSPSH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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