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Report for CCDS44594.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44594.1 Public Homo sapiens 11 KBTBD4 24 110 108 CCDS HistoryNCBI Gene:55709Re-query CCDS DB by CCDS ID:44594.1Re-query CCDS DB by GeneID:55709See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44594.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000430070.7 ENSP00000415106.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000430070.7Link to Ensembl Protein Viewer:ENSP00000415106.2Re-query CCDS DB by Nucleotide ID:ENST00000430070Re-query CCDS DB by Protein ID:ENSP00000415106
Original member Current member NCBI NM_018095.6 NP_060565.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018095.6Link to Protein Sequence:NP_060565.4Re-query CCDS DB by Nucleotide ID:NM_018095Re-query CCDS DB by Protein ID:NP_060565Link to BLAST:NP_060565.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060565.4 534 Q9NVX7-2 534 100% 0 0

Chromosomal Locations for CCDS 44594.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 47572930 47573790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47575593 47575699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47577411 47578028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47578933 47578951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1605 nt):
ATGAAAGGAGGGAACGCAGACAGCTGGCAGAGAGAGAAGTTGGCTAGCATGGAATCACCAGAGGAGCCTG
GAGCATCCATGGATGAGAACTACTTTGTGAACTACACTTTCAAAGATCGGTCACATTCAGGCCGTGTGGC
TCAAGGCATCATGAAACTGTGTCTAGAGGAGGAGCTCTTTGCTGATGTCACCATTTCGGTGGAAGGCCGG
GAGTTTCAGCTCCATCGGCTGGTCCTCTCAGCTCAGAGCTGCTTCTTCCGATCCATGTTCACTTCCAACC
TGAAGGAGGCCCACAACCGGGTGATTGTGCTGCAGGATGTCAGCGAGTCTGTTTTCCAGCTCCTGGTTGA
TTATATCTACCATGGGACTGTGAAACTTCGAGCTGAGGAGTTGCAGGAAATTTATGAGGTGTCAGACATG
TATCAGCTGACATCTCTCTTTGAGGAATGCTCTCGGTTTTTGGCCCGCACAGTGCAAGTGGGAAACTGCC
TTCAGGTGATGTGGCTGGCAGATCGGCACAGTGATCCTGAGCTCTATACGGCTGCCAAGCACTGTGCCAA
GACCCACCTGGCCCAGCTGCAGAATACAGAGGAATTTCTCCACTTGCCCCACCGCTTACTCACAGATATC
ATCTCGGATGGAGTTCCGTGTTCTCAGAACCCAACAGAGGCAATAGAAGCCTGGATCAACTTTAATAAAG
AGGAAAGAGAGGCTTTTGCAGAGTCACTCAGGACAAGCTTGAAGGAAATTGGGGAGAATGTGCACATTTA
CCTGATTGGGAAAGAGTCATCTCGTACCCACTCGTTGGCTGTGTCCTTGCACTGTGCAGAAGATGACTCC
ATCAGTGTAAGTGGCCAAAACAGTTTGTGCCACCAGATCACTGCGGCCTGCAAGCATGGTGGAGACTTGT
ATGTGGTGGGAGGGTCCATCCCACGGCGCATGTGGAAGTGCAACAATGCCACCGTTGACTGGGAGTGGTG
TGCTCCTTTGCCTCGGGACCGGCTCCAGCACACCCTGGTGTCTGTGCCCGGGAAAGATGCCATATATTCA
CTGGGTGGCAAGACACTGCAAGATACCCTCTCCAACGCAGTCATTTATTATCGCGTAGGTGATAATGTGT
GGACAGAGACAACTCAGCTAGAGGTGGCTGTGTCAGGGGCTGCTGGTGCCAACCTCAACGGGATCATCTA
CTTACTAGGGGGGGAGGAGAATGATCTGGACTTCTTTACCAAACCTTCCCGACTCATCCAGTGCTTTGAC
ACAGAGACAGACAAATGCCATGTGAAGCCCTATGTGCTGCCCTTTGCAGGCCGCATGCACGCAGCTGTGC
ATAAAGATCTGGTGTTCATCGTGGCTGAAGGGGACTCCCTGGTGTGCTACAATCCCTTGCTAGACAGCTT
CACCCGGCTTTGCCTTCCTGAGGCCTGGAGCTCTGCCCCATCCCTCTGGAAGATTGCCAGCTGTAACGGG
AGCATCTATGTCTTCCGGGACCGATATAAAAAGGGGGATGCCAACACCTACAAGCTTGACCCTGCCACTT
CAGCCGTAACTGTCACAAGAGGTATTAAGGTGCTGCTTACCAATTTGCAGTTTGTGTTGGCCTAA

Translation (534 aa):
MKGGNADSWQREKLASMESPEEPGASMDENYFVNYTFKDRSHSGRVAQGIMKLCLEEELFADVTISVEGR
EFQLHRLVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRAEELQEIYEVSDM
YQLTSLFEECSRFLARTVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDI
ISDGVPCSQNPTEAIEAWINFNKEEREAFAESLRTSLKEIGENVHIYLIGKESSRTHSLAVSLHCAEDDS
ISVSGQNSLCHQITAACKHGGDLYVVGGSIPRRMWKCNNATVDWEWCAPLPRDRLQHTLVSVPGKDAIYS
LGGKTLQDTLSNAVIYYRVGDNVWTETTQLEVAVSGAAGANLNGIIYLLGGEENDLDFFTKPSRLIQCFD
TETDKCHVKPYVLPFAGRMHAAVHKDLVFIVAEGDSLVCYNPLLDSFTRLCLPEAWSSAPSLWKIASCNG
SIYVFRDRYKKGDANTYKLDPATSAVTVTRGIKVLLTNLQFVLA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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