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Report for CCDS30608.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30608.1 Public Homo sapiens 1 TMEM82 24 110 108 CCDS HistoryNCBI Gene:388595Re-query CCDS DB by CCDS ID:30608.1Re-query CCDS DB by GeneID:388595See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30608.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375782.2 ENSP00000364938.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375782.2Link to Ensembl Protein Viewer:ENSP00000364938.1Re-query CCDS DB by Nucleotide ID:ENST00000375782Re-query CCDS DB by Protein ID:ENSP00000364938
Original member Current member NCBI NM_001013641.3 NP_001013663.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001013641.3Link to Protein Sequence:NP_001013663.1Re-query CCDS DB by Nucleotide ID:NM_001013641Re-query CCDS DB by Protein ID:NP_001013663Link to BLAST:NP_001013663.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013663.1 343 A0PJX8 343 100% 0 0

Chromosomal Locations for CCDS 30608.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 15742560 15742647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15742835 15742907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15743020 15743194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15744160 15744580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15746867 15747054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 15747546 15747632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1032 nt):
ATGTTCTCTCTTCCATCCCTCCCCTCCTGGCTCCCCGGCCTCCCCTCCCTCGAGTGGGGCTCTAGCCTCC
TTGACTCCCTCCTGCAAGGCCTGATCGGGGCCCTTGGAGTCTTGGTCCTGAACAGCCTCCTGAAAGTTTA
CTTCTTCGTGGGCTGTGCCAATGACCCGCAGCGGCGACCCGAAAAGGAGCGGCTTCGGGCCCAGTGGGCC
TCCCTGGAAACGGTGCACCTGGCAGGGCTGGCCCTGTTTCTGACGGTCGTGGGGTCCCGGGTGGCTGCCC
TCGTGGTGCTCGAGTTCTCCCTCCGGGCCGTGTCCACGCTGCTGTCCCTGGGCAAGGGCTCCCAGGGTGC
CGCCGAGAGGCTGCAGCTCTACCTGCTGTGCCAGTACTCGCTGGGCTGCGGGCTGACCTGTGGCCTGAGC
TTCCTGCAGGAGGGCGCCCCTCACCGCACGCTGAACCTGCTGCTGAGCCTCGGGCTGGCCACGCTGCTGG
GCCTGGGTGCCCGGCGCCTCCACCGCCACGTCTGCCGCCTCTACGAGCTGCACAGCAGCCAGCGCTACTG
TGGGGTGTGCCTGGGCCTGCTGGCCCATGCACATGGCCTCCCCCAGCTGCTGGGCCGTGCCCTGGCCATA
GCCTTTGCCGTGGGTGACCTGGCAGCTGTGGCCCTCATCAACCAGGACTTCCTGACCACCTCGGAGGCCA
TGCGGTTCTGGACACCGCTCACCATCTGCTACACGCTGCTGGTCATCTACATGCAGGAGGAGCAGCGGCA
GCACCCCGGCCTGCAGAGCCAGGTGCAGACGGTGCTGGTGCGCATGGGCGGCCTCTTCGTGCTGCTGCTG
ACTGTGGGTCGCTGGCTGGACCTGCTGGGCATCCTTGTCTCCCTACTGGGCGAGCTCTGGTGTCTCGTGG
GCGTCCGCACCCTGCTTGACCTCTGCCAGATACAGGATTTTCCATCCCAGAGGCCTCCAGTGTCAACACC
AAGCCAGCCCCTGCCCTCGGCACCCCAGTCCCAGAGTTCGGCCCCCTCTTGA

Translation (343 aa):
MFSLPSLPSWLPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRPEKERLRAQWA
SLETVHLAGLALFLTVVGSRVAALVVLEFSLRAVSTLLSLGKGSQGAAERLQLYLLCQYSLGCGLTCGLS
FLQEGAPHRTLNLLLSLGLATLLGLGARRLHRHVCRLYELHSSQRYCGVCLGLLAHAHGLPQLLGRALAI
AFAVGDLAAVALINQDFLTTSEAMRFWTPLTICYTLLVIYMQEEQRQHPGLQSQVQTVLVRMGGLFVLLL
TVGRWLDLLGILVSLLGELWCLVGVRTLLDLCQIQDFPSQRPPVSTPSQPLPSAPQSQSSAPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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