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Report for CCDS31939.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31939.1 Public Homo sapiens 12 ZNF26 24 110 108 CCDS HistoryNCBI Gene:7574Re-query CCDS DB by CCDS ID:31939.1Re-query CCDS DB by GeneID:7574See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31939.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328654.10 ENSP00000333725.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328654.10Link to Ensembl Protein Viewer:ENSP00000333725.5Re-query CCDS DB by Nucleotide ID:ENST00000328654Re-query CCDS DB by Protein ID:ENSP00000333725
Original member Current member NCBI NM_019591.4 NP_062537.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019591.4Link to Protein Sequence:NP_062537.2Re-query CCDS DB by Nucleotide ID:NM_019591Re-query CCDS DB by Protein ID:NP_062537Link to BLAST:NP_062537.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062537.2 533 P17031 533 100% 0 0

Chromosomal Locations for CCDS 31939.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 132986841 132986873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133007042 133007168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133007437 133007532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133010136 133011481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1602 nt):
ATGGCCACCAGTTTCCGGACAGCTTCGTGCTGGGGATTATTGTCATTCAAGGATATATCTATGGAGTTCA
CCTGGGATGAATGGCAGCTACTGGATTCTACACAGAAGTACCTGTACAGAGATGTGATATTGGAAAACTA
TCATAACCTGATATCAGTGGGGTATCATGGTACCAAGCCTGACTTAATCTTCAAGTTGGAACAAGGAGAA
GATCCATGGATAATAAATGCCAAAATTTCCAGGCAGAGCTGTCCAGATGGCTGGGAAGAATGGTACCAGA
ACAATCAAGATGAGCTTGAGAGTATTGAAAGAAGCTATGCTTGTAGTGTGTTGGGAAGACTTAATCTGAG
CAAAACCCATGATTCTTCAAGACAGAGACTCTATAACACACGTGGAAAAAGTTTGACACAAAACTCAGCT
CCAAGCAGAAGTTATTTAAGAAAGAATCCTGATAAGTTTCATGGTTATGAAGAACCATATTTTCTTAAGC
ATCAAAGAGCTCATAGCATAGAAAAAAACTGTGTGTGTAGTGAATGTGGGAAAGCTTTTCGTTGTAAGTC
ACAGCTCATTGTACATCTCAGAATTCATACAGGAGAGAGACCTTATGAATGCAGTAAATGTGAAAGAGCC
TTCAGTGCCAAGTCAAACCTTAATGCTCATCAGAGAGTTCATACAGGAGAAAAACCCTACTCATGTAGTG
AGTGCGAGAAGGTCTTCTCTTTCAGGTCACAGCTCATTGTCCATCAGGAAATTCACACAGGAGGGAAACC
CTATGGCTGCAGTGAATGTGGGAAAGCCTACAGTTGGAAATCACAGCTTCTTTTACACCAGAGAAGTCAC
ACAGGAGTGAAACCGTATGAATGCAGCGAATGTGGGAAAGCCTTTAGTTTGAAGTCTCCATTCGTTGTAC
ACCAGAGAACTCATACAGGAGTGAAACCCCATAAATGCAGTGAATGTGGGAAAGCCTTTAGGAGTAAGTC
CTATCTCCTTGTTCACATCCGAATGCATACAGGAGAAAAACCCTATCAATGCAGTGATTGTGGGAAAGCC
TTCAATATGAAGACACAACTCATTGTACATCAGGGAGTTCACACAGGAAATAATCCTTATCAATGCGGTG
AATGTGGGAAAGCCTTTGGTAGGAAGGAACAGCTCACTGCACATCTGAGAGCTCATGCAGGAGAGAAGCC
CTATGGATGCAGTGAATGTGGGAAGGCTTTCAGCAGCAAGTCATACCTTGTTATACATAGGAGAACACAC
ACCGGAGAGAGACCCTATGAATGTAGTTTGTGTGAGAGAGCCTTTTGTGGAAAATCACAGCTGATTATAC
ATCAGAGAACTCATTCAACTGAGAAGCCCTATGAATGCAATGAATGTGAAAAAGCCTACCCTAGGAAGGC
ATCACTTCAGATACACCAGAAAACTCATTCGGGAGAGAAACCTTTTAAATGCAGTGAATGTGGAAAAGCC
TTCACTCAGAAGTCATCTCTCAGTGAACATCAGAGAGTTCACACCGGAGAGAAACCATGGAAATGCTCTG
AATGTGGGAAATCCTTCTGTTGGAATTCAGGGCTTCGTATACATCGGAAGACTCATAAATGA

Translation (533 aa):
MATSFRTASCWGLLSFKDISMEFTWDEWQLLDSTQKYLYRDVILENYHNLISVGYHGTKPDLIFKLEQGE
DPWIINAKISRQSCPDGWEEWYQNNQDELESIERSYACSVLGRLNLSKTHDSSRQRLYNTRGKSLTQNSA
PSRSYLRKNPDKFHGYEEPYFLKHQRAHSIEKNCVCSECGKAFRCKSQLIVHLRIHTGERPYECSKCERA
FSAKSNLNAHQRVHTGEKPYSCSECEKVFSFRSQLIVHQEIHTGGKPYGCSECGKAYSWKSQLLLHQRSH
TGVKPYECSECGKAFSLKSPFVVHQRTHTGVKPHKCSECGKAFRSKSYLLVHIRMHTGEKPYQCSDCGKA
FNMKTQLIVHQGVHTGNNPYQCGECGKAFGRKEQLTAHLRAHAGEKPYGCSECGKAFSSKSYLVIHRRTH
TGERPYECSLCERAFCGKSQLIIHQRTHSTEKPYECNECEKAYPRKASLQIHQKTHSGEKPFKCSECGKA
FTQKSSLSEHQRVHTGEKPWKCSECGKSFCWNSGLRIHRKTHK


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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