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Report for CCDS3071.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3071.1 Public Homo sapiens 3 MRPL3 24 110 108 CCDS HistoryNCBI Gene:11222Re-query CCDS DB by CCDS ID:3071.1Re-query CCDS DB by GeneID:11222See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3071.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264995.8 ENSP00000264995.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000264995.8Link to Ensembl Protein Viewer:ENSP00000264995.2Re-query CCDS DB by Nucleotide ID:ENST00000264995Re-query CCDS DB by Protein ID:ENSP00000264995
Original member Current member NCBI NM_007208.4 NP_009139.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007208.4Link to Protein Sequence:NP_009139.1Re-query CCDS DB by Nucleotide ID:NM_007208Re-query CCDS DB by Protein ID:NP_009139Link to BLAST:NP_009139.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009139.1 348 P09001 348 100% 0 0

Chromosomal Locations for CCDS 3071.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 131462723 131462875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131468091 131468168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131469696 131469773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131471171 131471279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131487680 131487740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131489981 131490080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131498179 131498277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131500430 131500521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131501531 131501715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131502730 131502821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1047 nt):
ATGCCGGGTTGGAGGCTGCTGACGCAGGTCGGCGCCCAGGTGCTGGGTCGACTCGGGGACGGCCTGGGTG
CTGCCCTGGGCCCGGGGAACAGAACACACATCTGGCTTTTTGTTAGAGGTCTTCATGGAAAGAGTGGTAC
ATGGTGGGATGAGCATCTTTCTGAAGAAAATGTCCCATTCATTAAGCAGTTGGTCTCTGATGAAGATAAA
GCCCAATTAGCAAGTAAACTGTGTCCTCTGAAAGATGAACCATGGCCTATACATCCTTGGGAACCAGGTT
CCTTTAGAGTTGGTCTTATTGCCTTGAAGCTGGGCATGATGCCTTTATGGACCAAGGATGGTCAAAAGCA
TGTGGTCACATTACTTCAGGTACAAGACTGTCATGTCTTAAAATATACGTCAAAGGAAAACTGTAATGGA
AAAATGGCAACCCTGTCTGTAGGAGGAAAAACTGTATCACGTTTTCGTAAAGCTACATCCATATTGGAAT
TTTACCGGGAACTTGGATTGCCGCCGAAACAGACAGTTAAAATCTTTAATATAACAGATAATGCTGCAAT
TAAACCAGGCACTCCTCTTTATGCTGCTCACTTTCGTCCAGGACAGTATGTGGATGTCACAGCCAAAACT
ATTGGTAAAGGTTTTCAAGGTGTCATGAAAAGATGGGGATTTAAAGGCCAGCCTGCTACGCATGGTCAAA
CGAAAACCCACAGGAGACCTGGAGCTGTTGCAACTGGTGATATTGGCAGAGTCTGGCCTGGAACTAAAAT
GCCTGGAAAAATGGGAAACATATACAGGACAGAATATGGACTGAAAGTGTGGAGAATAAACACAAAGCAC
AACATAATCTATGTAAATGGCTCTGTACCTGGACATAAAAATTGCTTAGTAAAGGTCAAAGATTCTAAAC
TGCCTGCATATAAGGATCTCGGTAAAAATCTACCATTCCCTACATATTTTCCTGATGGAGATGAAGAGGA
ACTGCCAGAAGATTTGTATGATGAAAACGTGTGTCAGCCCGGTGCGCCTTCTATTACATTTGCCTAA

Translation (348 aa):
MPGWRLLTQVGAQVLGRLGDGLGAALGPGNRTHIWLFVRGLHGKSGTWWDEHLSEENVPFIKQLVSDEDK
AQLASKLCPLKDEPWPIHPWEPGSFRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNG
KMATLSVGGKTVSRFRKATSILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTAKT
IGKGFQGVMKRWGFKGQPATHGQTKTHRRPGAVATGDIGRVWPGTKMPGKMGNIYRTEYGLKVWRINTKH
NIIYVNGSVPGHKNCLVKVKDSKLPAYKDLGKNLPFPTYFPDGDEEELPEDLYDENVCQPGAPSITFA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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