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Report for CCDS44557.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44557.1 Public Homo sapiens 11 MUC15 24 110 108 CCDS HistoryNCBI Gene:143662Re-query CCDS DB by CCDS ID:44557.1Re-query CCDS DB by GeneID:143662See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 44557.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000436318.6 ENSP00000416753.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000436318.6Link to Ensembl Protein Viewer:ENSP00000416753.2Re-query CCDS DB by Nucleotide ID:ENST00000436318Re-query CCDS DB by Protein ID:ENSP00000416753
Original member Current member EBI ENST00000529533.6 ENSP00000431983.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000529533.6Link to Ensembl Protein Viewer:ENSP00000431983.1Re-query CCDS DB by Nucleotide ID:ENST00000529533Re-query CCDS DB by Protein ID:ENSP00000431983
Original member Current member NCBI NM_001135091.2 NP_001128563.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001135091.2Link to Protein Sequence:NP_001128563.1Re-query CCDS DB by Nucleotide ID:NM_001135091Re-query CCDS DB by Protein ID:NP_001128563Link to BLAST:NP_001128563.1

Chromosomal Locations for CCDS 44557.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 26561065 26561225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 26563116 26563265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 26565165 26565896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 26567052 26567094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1086 nt):
ATGGGCATAATACAATCTATTCTTGCCACATCAAGGGATTGTTATTCCTTTAAAAAAAAACCAATACCAA
AGAAGCCTACAATGTTGGCCTTAGCCAAAATTCTGTTGATTTCAACGTTGTTTTATTCACTTCTATCGGG
GAGCCATGGAAAAGAAAATCAAGACATAAACACAACACAGAACATTGCAGAAGTTTTTAAAACAATGGAA
AATAAACCTATTTCTTTGGAAAGTGAAGCAAACTTAAACTCAGATAAAGAAAATATAACCACCTCAAATC
TCAAGGCGAGTCATTCCCCTCCTTTGAATCTACCCAACAACAGCCACGGAATAACAGATTTCTCCAGTAA
CTCATCAGCAGAGCATTCTTTGGGCAGTCTAAAACCCACATCTACCATTTCCACAAGCCCTCCCTTGATC
CATAGCTTTGTTTCTAAAGTGCCTTGGAATGCACCTATAGCAGATGAAGATCTTTTGCCCATCTCAGCAC
ATCCCAATGCTACACCTGCTCTGTCTTCAGAAAACTTCACTTGGTCTTTGGTCAATGACACCGTGAAAAC
TCCTGATAACAGTTCCATTACAGTTAGCATCCTCTCTTCAGAACCAACTTCTCCATCTGTGACCCCCTTG
ATAGTGGAACCAAGTGGATGGCTTACCACAAACAGTGATAGCTTCACTGGGTTTACCCCTTATCAAGAAA
AAACAACTCTACAGCCTACCTTAAAATTCACCAATAATTCAAAACTCTTTCCAAATACGTCAGATCCCCA
AAAAGAAAATAGAAATACAGGAATAGTATTCGGGGCCATTTTAGGTGCTATTCTGGGTGTCTCATTGCTT
ACTCTTGTGGGCTACTTGTTGTGTGGAAAAAGGAAAACGGATTCATTTTCCCATCGGCGACTTTATGACG
ACAGAAATGAACCAGTTCTGCGATTAGACAATGCACCGGAACCTTATGATGTGAGTTTTGGGAATTCTAG
CTACTACAATCCAACTTTGAATGATTCAGCCATGCCAGAAAGTGAAGAAAATGCACGTGATGGCATTCCT
ATGGATGACATACCTCCACTTCGTACTTCTGTATAG

Translation (361 aa):
MGIIQSILATSRDCYSFKKKPIPKKPTMLALAKILLISTLFYSLLSGSHGKENQDINTTQNIAEVFKTME
NKPISLESEANLNSDKENITTSNLKASHSPPLNLPNNSHGITDFSSNSSAEHSLGSLKPTSTISTSPPLI
HSFVSKVPWNAPIADEDLLPISAHPNATPALSSENFTWSLVNDTVKTPDNSSITVSILSSEPTSPSVTPL
IVEPSGWLTTNSDSFTGFTPYQEKTTLQPTLKFTNNSKLFPNTSDPQKENRNTGIVFGAILGAILGVSLL
TLVGYLLCGKRKTDSFSHRRLYDDRNEPVLRLDNAPEPYDVSFGNSSYYNPTLNDSAMPESEENARDGIP
MDDIPPLRTSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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