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Report for CCDS31220.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31220.1 Public Homo sapiens 10 NUDT13 24 110 108 CCDS HistoryNCBI Gene:25961Re-query CCDS DB by CCDS ID:31220.1Re-query CCDS DB by GeneID:25961See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31220.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357321.9 ENSP00000349874.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357321.9Link to Ensembl Protein Viewer:ENSP00000349874.4Re-query CCDS DB by Nucleotide ID:ENST00000357321Re-query CCDS DB by Protein ID:ENSP00000349874
Original member Current member NCBI NM_015901.6 NP_056985.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015901.6Link to Protein Sequence:NP_056985.3Re-query CCDS DB by Nucleotide ID:NM_015901Re-query CCDS DB by Protein ID:NP_056985Link to BLAST:NP_056985.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056985.3 352 Q86X67-1 352 100% 0 0

Chromosomal Locations for CCDS 31220.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 73114366 73114448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73120018 73120157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73122175 73122309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73124214 73124320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73125118 73125243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73125398 73125509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73126673 73126827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73130703 73130903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1059 nt):
ATGTCCCTGTATTGTGGAATAGCTTGCAGGAGAAAATTTTTTTGGTGCTATAGGCTGCTGTCAACCTATG
TTACTAAGACACGGTATTTATTTGAACTGAAGGAAGATGATGATGCATGTAAAAAAGCCCAGCAAACAGG
AGCGTTTTACCTCTTTCATAGTCTGGCTCCTCTGCTTCAGACTTCAGCACATCAATACCTGGCCCCCCGG
CACAGCCTGTTAGAGTTGGAAAGGCTCCTGGGTAAATTTGGACAGGATGCACAAAGAATAGAAGATTCTG
TGCTGATTGGATGCTCTGAGCAGCAGGAAGCATGGTTTGCTCTGGATCTAGGTCTGGATAGCTCCTTTTC
CATAAGTGCCTCCTTACACAAACCTGAAATGGAGACAGAGCTCAAGGGGTCTTTCATTGAGCTGAGAAAG
GCACTCTTTCAACTCAATGCAAGGGATGCCTCCTTGCTGTCCACGGCTCAAGCTCTTCTCCGCTGGCATG
ATGCTCATCAGTTCTGCAGCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTG
CCCTTCCAATAATATAATCTATTATCCACAGATGGCTCCTGTGGCGATCACGCTGGTGTCAGATGGGACC
CGATGCCTGCTTGCCCGCCAAAGCTCCTTTCCCAAGGGAATGTATTCTGCCTTGGCAGGTTTTTGTGATA
TAGGTGAAAGTGTGGAAGAGACCATCCGCCGAGAAGTTGCAGAAGAGGTGGGATTGGAGGTGGAAAGCCT
GCAGTACTATGCATCCCAGCATTGGCCCTTCCCTAGTGGCTCACTCATGATTGCTTGCCATGCAACTGTG
AAACCAGGGCAGACAGAAATCCAGGTGAACTTGAGAGAATTAGAGACAGCTGCCTGGTTCAGTCATGATG
AGGTAGCCACAGCCCTGAAGAGAAAGGGCCCCTATACTCAGCAACAGAATGGGACTTTCCCATTCTGGCT
GCCCCCTAAGTTAGCCATCTCCCACCAACTGATTAAGGAGTGGGTGGAAAAACAGACCTGTTCTTCCCTG
CCTGCTTAG

Translation (352 aa):
MSLYCGIACRRKFFWCYRLLSTYVTKTRYLFELKEDDDACKKAQQTGAFYLFHSLAPLLQTSAHQYLAPR
HSLLELERLLGKFGQDAQRIEDSVLIGCSEQQEAWFALDLGLDSSFSISASLHKPEMETELKGSFIELRK
ALFQLNARDASLLSTAQALLRWHDAHQFCSRSGQPTKKNVAGSKRVCPSNNIIYYPQMAPVAITLVSDGT
RCLLARQSSFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYASQHWPFPSGSLMIACHATV
KPGQTEIQVNLRELETAAWFSHDEVATALKRKGPYTQQQNGTFPFWLPPKLAISHQLIKEWVEKQTCSSL
PA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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