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Report for CCDS10035.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10035.1 Public Homo sapiens 15 EMC4 24 110 108 CCDS HistoryNCBI Gene:51234Re-query CCDS DB by CCDS ID:10035.1Re-query CCDS DB by GeneID:51234See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10035.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000267750.9 ENSP00000267750.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000267750.9Link to Ensembl Protein Viewer:ENSP00000267750.4Re-query CCDS DB by Nucleotide ID:ENST00000267750Re-query CCDS DB by Protein ID:ENSP00000267750
Original member Current member NCBI NM_016454.4 NP_057538.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016454.4Link to Protein Sequence:NP_057538.1Re-query CCDS DB by Nucleotide ID:NM_016454Re-query CCDS DB by Protein ID:NP_057538Link to BLAST:NP_057538.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057538.1 183 Q5J8M3-1 183 100% 0 0

Chromosomal Locations for CCDS 10035.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 34225115 34225200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34225536 34225650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34227693 34227846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34228429 34228589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34229753 34229788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (552 nt):
ATGACGGCCCAGGGGGGCCTGGTGGCTAACCGAGGCCGGCGCTTCAAGTGGGCCATTGAGCTAAGCGGGC
CTGGAGGAGGCAGCAGGGGTCGAAGTGACCGGGGCAGTGGCCAGGGAGACTCGCTCTACCCAGTCGGTTA
CTTGGACAAGCAAGTGCCTGATACCAGCGTGCAAGAGACAGACCGGATCCTGGTGGAGAAGCGCTGCTGG
GACATCGCCTTGGGTCCCCTCAAACAGATTCCCATGAATCTCTTCATCATGTACATGGCAGGCAATACTA
TCTCCATCTTCCCTACTATGATGGTGTGTATGATGGCCTGGCGACCCATTCAGGCACTTATGGCCATTTC
AGCCACTTTCAAGATGTTAGAAAGTTCAAGCCAGAAGTTTCTTCAGGGTTTGGTCTATCTCATTGGGAAC
CTGATGGGTTTGGCATTGGCTGTTTACAAGTGCCAGTCCATGGGACTGTTACCTACACATGCATCGGATT
GGTTAGCCTTCATTGAGCCCCCTGAGAGAATGGAGTTCAGTGGTGGAGGACTGCTTTTGTGA

Translation (183 aa):
MTAQGGLVANRGRRFKWAIELSGPGGGSRGRSDRGSGQGDSLYPVGYLDKQVPDTSVQETDRILVEKRCW
DIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESSSQKFLQGLVYLIGN
LMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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