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Report for CCDS45754.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45754.1 Public Homo sapiens 17 TANC2 24 110 108 CCDS HistoryNCBI Gene:26115Re-query CCDS DB by CCDS ID:45754.1Re-query CCDS DB by GeneID:26115See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 45754.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000424789.6 ENSP00000387593.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000424789.6Link to Ensembl Protein Viewer:ENSP00000387593.2Re-query CCDS DB by Nucleotide ID:ENST00000424789Re-query CCDS DB by Protein ID:ENSP00000387593
Original member Current member NCBI NM_025185.4 NP_079461.2 Accepted alive Link to Nucleotide Sequence:NM_025185.4Link to Protein Sequence:NP_079461.2Re-query CCDS DB by Nucleotide ID:NM_025185Re-query CCDS DB by Protein ID:NP_079461Link to BLAST:NP_079461.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079461.2 1990 Q9HCD6-1 1990 100% 0 0

Chromosomal Locations for CCDS 45754.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 63009560 63009626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63073943 63074014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63099175 63099246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63193991 63194139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63200771 63200957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63237814 63238077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63267748 63267873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63314388 63314669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63318957 63319090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63340101 63340332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63351250 63351416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63354783 63355390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63379718 63379826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63388635 63388757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63389308 63389544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63395743 63395928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63398821 63398914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63405122 63405255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63406154 63406277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63411511 63411686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63411998 63412130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63413543 63413634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63415528 63415674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63418307 63418407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63419999 63421955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5973 nt):
ATGTTTCGGAATAGTCTCAAGATGCTGCTTACTGGTGGGAAATCAAGTCGTAAAAACAGGTCAAGTGATG
GAGGGAGCGAGGAACCACCGGATCGAAGACAGTCAAGTGTAGACTCTCGCCAAAGCCGCTCTGGGCAAGG
TGGCATCTCCACAGAAAGCGACTGTGCTTTTGAGCCAGACTACGCTGTCCCGCCACTTCCAGTGAGTGAA
GGTGATGCTGAACAGGAGCTTGGCCCCCCTCCATCTGTAGATGAGGCAGCAAACACACTCATGACTCGTC
TGGGTTTCCTCCTTGGAGAGAAAGTCACAGAAGTTCAGCCAGGTGACCAATACAGCATGGAAGTACAGGA
TGAAAATCAGACCTCAGCAATCACCCAGCGGATAAGTCCTTGTTCCACTCTGACTAGCAGCACTGCCTCT
CCACCAGCCAGTAGCCCCTGCTCTACACTCCCACCCATCAGTACAAATGCAACTGCCAAGGACTGCAGCT
ATGGGGCTGTTACTAGTCCAACCTCTACCCTTGAAAGCAGAGATAGTGGCATCATTGCTACATTAACAAG
CTATTCTGAAAATGTGGAACGCACAAAATATGCTGGGGAAAGCAGTAAAGAATTAGGATCTGGAGGAAAC
ATAAAACCTTGGCAGTCTCAAAAATCCAGCATGGACTCCTGTTTGTATCGAGTAGATGAAAACATGACTG
CTTCCACCTATAGTCTGAATAAGATCCCAGAGAGAAATTTGGAAACAGTGTTATCTCAATCAGTACAGTC
TATTCCTTTGTATCTCATGCCACGGCCAAATTCAGTAGCAGCCACCAGCTCTGCCCACTTGGAAGACCTT
GCTTACCTGGATGAGCAGAGACATACACCTTTGAGAACTTCTCTACGAATGCCAAGACAGAGCATGGGTG
GTGCTCGCACACAGCAGGATTTAAGAGTTCGCTTTGCACCTTATAGGCCTCCAGATATCTCCTTGAAGCC
TCTGCTCTTTGAAGTGCCCAGCATCACTACAGAGTCAGTGTTTGTTGGCCGAGATTGGGTTTTCCACGAA
ATAGATGCTCAACTTCAAAGTTCAAATGCCAGCGTGAACCAAGGAGTAGTGATTGTGGGAAACATTGGAT
TCGGCAAAACTGCCATCATCTCCAGACTGGTGGCCCTCAGCTGCCATGGTACAAGGATGAGACAGATCGC
CTCAGACAGCCCACATGCCTCCCCCAAACATGTGGATGCCAACAGAGAGCTGCCACTCACACAGCCACCT
TCAGCCCACTCATCTATCACCAGTGGAAGCTGCCCAGGAACTCCGGAAATGCGCAGGCGGCAGGAGGAGG
CTATGCGAAGACTAGCCTCGCAGGTGGTTGCCTATCACTATTGTCAAGCAGATAATGCCTACACTTGCTT
GGTGCCAGAATTTGTCCACAATGTTGCTGCCTTGCTCTGCCGCTCACCTCAGCTGACAGCCTATCGGGAG
CAGCTTCTTCGGGAACCTCACCTGCAGAGCATGCTGAGCCTTCGTTCCTGTGTTCAAGACCCCATGGCCT
CCTTCCGGAGGGGAGTTCTGGAGCCACTAGAAAATCTCCATAAAGAGAGAAAAATCCCAGATGAAGATTT
CATCATTTTAATTGATGGATTAAATGAAGCAGAATTTCACAAACCGGATTATGGGGATACAATTGTATCG
TTTCTGAGTAAAATGATCGGAAAGTTTCCTTCTTGGCTCAAACTAATTGTAACAGTTAGGACCAGTTTAC
AGGAAATTACCAAGCTGCTGCCTTTCCATAGGATTTTTTTGGATCGACTAGAAGAGAATGAAGCCATAGA
CCAGGACCTGCAGGCTTACATCCTGCACCGGATACACAGCAGCTCAGAGATCCAGAATAACATTTCACTT
AATGGCAAAATGGACAATACTACATTTGGCAAACTCAGTTCTCATCTCAAGACCCTCAGTCAAGGGTCCT
ATCTATATCTGAAACTTACATTTGACCTCATAGAGAAAGGCTATCTAGTGTTAAAGAGCTCTAGCTACAA
AGTAGTTCCTGTTTCGCTCTCAGAGGTTTATTTACTCCAGTGCAATATGAAGTTCCCAACCCAGTCTTCC
TTTGACCGGGTGATGCCTCTCCTGAATGTGGCAGTGGCCTCTCTCCACCCACTGACTGATGAGCATATCT
TCCAGGCCATCAATGCTGGGAGCATTGAAGGCACACTAGAATGGGAGGATTTTCAGCAGAGAATGGAGAA
CCTCTCCATGTTCCTAATCAAGCGCAGAGACATGACTCGTATGTTTGTACATCCTTCTTTTCGAGAATGG
CTTATCTGGAGAGAAGAAGGAGAGAAAACCAAATTTCTCTGTGATCCGAGGAGTGGTCACACGTTACTTG
CCTTCTGGTTTTCCCGCCAAGAGGGAAAACTAAACCGACAGCAGACTATTGAACTGGGACATCACATCCT
CAAAGCACACATTTTTAAGGGTTTGAGTAAAAAAGTTGGTGTATCATCCTCCATCCTCCAAGGTCTCTGG
ATCTCTTATAGCACAGAAGGTCTTTCCATGGCACTGGCGTCTTTACGAAATCTCTACACTCCAAATATAA
AGGTCAGCCGACTGCTGATTTTGGGAGGTGCCAATATTAATTACCGGACAGAGGTTTTAAATAATGCTCC
AATTCTATGTGTTCAGTCCCATCTTGGTTACACAGAAATGGTAGCCCTGCTGCTGGAGTTCGGGGCCAAC
GTGGATGCCTCTTCTGAAAGTGGCCTGACTCCCCTGGGATATGCTGCAGCAGCAGGGTACCTGAGCATTG
TGGTGCTGCTGTGCAAGAAACGGGCCAAGGTGGATCATTTGGATAAGAACGGGCAGTGTGCTTTGGTTCA
TGCTGCACTCCGAGGTCATCTGGAGGTTGTCAAGTTTTTGATTCAGTGTGACTGGACGATGGCCGGCCAG
CAGCAAGGAGTATTTAAGAAGAGCCATGCCATCCAACAGGCCCTCATTGCTGCAGCCAGCATGGGTTATA
CTGAGATTGTCTCCTACCTACTTGATCTTCCAGAAAAAGATGAAGAGGAAGTAGAGCGAGCACAGATCAA
CAGCTTTGACAGTCTCTGGGGAGAGACAGCCCTAACAGCTGCAGCCGGAAGGGGCAAACTGGAGGTGTGC
CGTTTGCTCTTGGAACAAGGGGCGGCAGTGGCCCAGCCAAACCGCCGAGGAGCAGTGCCACTATTCAGCA
CAGTGCGCCAGGGCCACTGGCAGATTGTTGATCTTTTACTCACCCATGGAGCTGATGTCAACATGGCAGA
CAAGCAGGGCCGCACTCCCCTGATGATGGCTGCTTCCGAAGGCCATCTAGGAACCGTGGACTTTCTGCTT
GCACAAGGTGCCTCCATTGCTCTTATGGACAAAGAAGGATTGACAGCCCTCAGCTGGGCTTGTTTGAAGG
GCCATCTCTCAGTAGTACGTTCTCTGGTGGATAACGGAGCTGCCACAGACCATGCTGACAAGAATGGCCG
TACCCCACTGGATCTGGCAGCTTTCTATGGCGATGCTGAGGTGGTCCAGTTCCTGGTAGATCATGGGGCC
ATGATCGAGCACGTTGACTACAGTGGAATGCGCCCTTTGGATAGGGCAGTGGGGTGCCGGAACACTTCTG
TTGTTGTCACTCTTCTGAAGAAAGGAGCCAAGATAGGTCCAGCCACATGGGCGATGGCCACCTCCAAGCC
AGACATCATGATCATCCTGTTGAGCAAGCTGATGGAAGAGGGGGACATGTTTTATAAGAAAGGTAAAGTA
AAGGAAGCTGCCCAGCGCTACCAGTACGCCCTGAAGAAGTTCCCTAGAGAAGGGTTTGGTGAGGACTTGA
AAACTTTCCGGGAACTAAAGGTGTCTCTCCTCCTCAACCTCTCTCGGTGTCGCAGGAAAATGAACGATTT
TGGAATGGCGGAGGAATTTGCTACTAAGGCCCTGGAGCTGAAACCGAAATCTTATGAAGCTTACTATGCG
AGAGCAAGGGCAAAACGCAGCAGCAGACAGTTCGCAGCAGCCTTAGAGGACCTGAACGAGGCCATCAAGC
TGTGTCCCAACAACCGTGAGATCCAGAGACTTCTGCTGAGAGTGGAAGAAGAGTGTAGACAGATGCAGCA
GCCACAGCAGCCACCGCCGCCACCGCAGCCTCAGCAGCAGTTGCCGGAAGAAGCAGAACCTGAGCCACAG
CATGAAGACATATACTCTGTACAGGATATATTCGAGGAGGAGTACCTGGAACAGGATGTTGAAAATGTTT
CCATTGGCCTCCAGACAGAGGCCCGGCCCAGCCAGGGGCTCCCGGTCATCCAGAGCCCACCCTCCTCTCC
CCCGCATCGGGACTCAGCCTACATCTCCAGCTCACCTCTTGGCTCTCATCAGGTTTTTGACTTCCGGTCC
AGTAGTTCTGTAGGCTCTCCCACTAGACAGACCTATCAGTCCACCTCACCTGCCCTTTCTCCAACTCATC
AGAACTCACATTACAGGCCTAGCCCACCACACACTTCCCCGGCTCATCAGGGAGGATCTTACCGTTTCAG
CCCCCCTCCTGTGGGAGGACAGGGCAAAGAATACCCAAGCCCTCCCCCTTCCCCTCTCCGGAGAGGCCCT
CAGTATCGGGCCAGCCCTCCAGCTGAAAGTATGAGTGTCTATAGATCCCAGTCTGGTTCACCCGTGCGCT
ATCAGCAGGAAACAAGCGTCAGTCAGCTTCCTGGCAGACCCAAATCTCCATTATCCAAAATGGCCCAGCG
GCCCTACCAGATGCCTCAGCTCCCTGTGGCAGTTCCCCAGCAAGGGCTCAGGCTACAGCCTGCCAAGGCC
CAGATTGTGAGAAGTAACCAGCCCAGCCCAGCCGTCCATTCAAGCACCGTCATCCCCACAGGAGCCTATG
GCCAAGTAGCCCATTCAATGGCCAGTAAATACCAGTCTTCACAAGGAGACATAGGAGTCAGCCAGAGCCG
GTTGGTTTATCAAGGGTCAATTGGGGGAATCGTAGGGGATGGAAGGCCGGTGCAGCATGTCCAAGCCAGC
CTGAGTGCAGGCGCCATCTGTCAGCATGGAGGATTGACCAAAGAGGATCTTCCACAGCGACCTTCCTCAG
CATACCGAGGTGGCGTGAGATACAGCCAGACACCACAGATCGGACGCAGCCAGTCAGCATCCTATTACCC
AGTCTGTCACTCAAAACTAGATCTGGAGCGCTCCTCCAGCCAACTAGGTTCCCCTGATGTGTCGCATTTA
ATCAGAAGACCTATCAGTGTCAACCCTAACGAAATCAAACCGCACCCGCCAACTCCCAGGCCGTTGCTGC
ATTCCCAAAGTGTAGGCCTTCGCTTCTCTCCATCTAGCAATAGTATCTCCTCCACCTCCAACCTAACTCC
GACCTTCCGGCCATCTTCTTCCATCCAGCAAATGGAGATCCCACTGAAACCTGCATATGAGAGGTCATGT
GACGAGCTGTCGCCAGTGTCTCCAACTCAAGGAGGTTACCCCAGTGAGCCCACCCGATCCAGGACCACAC
CATTCATGGGGATCATAGATAAAACAGCACGGACTCAGCAGTACCCCCACCTCCACCAGCAGAATCGGAC
CTGGGCAGTGTCATCTGTGGACACCGTCCTCAGTCCCACGTCTCCAGGCAACCTGCCTCAGCCTGAGTCC
TTCAGTCCACCATCATCCATCAGCAACATTGCCTTTTATAACAAAACCAACAATGCACAGAATGGCCATT
TGCTGGAGGACGATTATTACAGCCCCCATGGGATGCTGGCTAACGGGTCTCGTGGAGACCTCTTGGAGCG
AGTCAGCCAGGCCTCCTCCTATCCCGACGTGAAGGTAGCTCGGACTCTACCTGTGGCTCAGGCATACCAG
GACAACCTGTACAGGCAGCTGTCCCGAGACTCTCGGCAAGGGCAGACATCCCCTATCAAACCAAAGAGAC
CGTTCGTGGAGTCTAATGTTTAA

Translation (1990 aa):
MFRNSLKMLLTGGKSSRKNRSSDGGSEEPPDRRQSSVDSRQSRSGQGGISTESDCAFEPDYAVPPLPVSE
GDAEQELGPPPSVDEAANTLMTRLGFLLGEKVTEVQPGDQYSMEVQDENQTSAITQRISPCSTLTSSTAS
PPASSPCSTLPPISTNATAKDCSYGAVTSPTSTLESRDSGIIATLTSYSENVERTKYAGESSKELGSGGN
IKPWQSQKSSMDSCLYRVDENMTASTYSLNKIPERNLETVLSQSVQSIPLYLMPRPNSVAATSSAHLEDL
AYLDEQRHTPLRTSLRMPRQSMGGARTQQDLRVRFAPYRPPDISLKPLLFEVPSITTESVFVGRDWVFHE
IDAQLQSSNASVNQGVVIVGNIGFGKTAIISRLVALSCHGTRMRQIASDSPHASPKHVDANRELPLTQPP
SAHSSITSGSCPGTPEMRRRQEEAMRRLASQVVAYHYCQADNAYTCLVPEFVHNVAALLCRSPQLTAYRE
QLLREPHLQSMLSLRSCVQDPMASFRRGVLEPLENLHKERKIPDEDFIILIDGLNEAEFHKPDYGDTIVS
FLSKMIGKFPSWLKLIVTVRTSLQEITKLLPFHRIFLDRLEENEAIDQDLQAYILHRIHSSSEIQNNISL
NGKMDNTTFGKLSSHLKTLSQGSYLYLKLTFDLIEKGYLVLKSSSYKVVPVSLSEVYLLQCNMKFPTQSS
FDRVMPLLNVAVASLHPLTDEHIFQAINAGSIEGTLEWEDFQQRMENLSMFLIKRRDMTRMFVHPSFREW
LIWREEGEKTKFLCDPRSGHTLLAFWFSRQEGKLNRQQTIELGHHILKAHIFKGLSKKVGVSSSILQGLW
ISYSTEGLSMALASLRNLYTPNIKVSRLLILGGANINYRTEVLNNAPILCVQSHLGYTEMVALLLEFGAN
VDASSESGLTPLGYAAAAGYLSIVVLLCKKRAKVDHLDKNGQCALVHAALRGHLEVVKFLIQCDWTMAGQ
QQGVFKKSHAIQQALIAAASMGYTEIVSYLLDLPEKDEEEVERAQINSFDSLWGETALTAAAGRGKLEVC
RLLLEQGAAVAQPNRRGAVPLFSTVRQGHWQIVDLLLTHGADVNMADKQGRTPLMMAASEGHLGTVDFLL
AQGASIALMDKEGLTALSWACLKGHLSVVRSLVDNGAATDHADKNGRTPLDLAAFYGDAEVVQFLVDHGA
MIEHVDYSGMRPLDRAVGCRNTSVVVTLLKKGAKIGPATWAMATSKPDIMIILLSKLMEEGDMFYKKGKV
KEAAQRYQYALKKFPREGFGEDLKTFRELKVSLLLNLSRCRRKMNDFGMAEEFATKALELKPKSYEAYYA
RARAKRSSRQFAAALEDLNEAIKLCPNNREIQRLLLRVEEECRQMQQPQQPPPPPQPQQQLPEEAEPEPQ
HEDIYSVQDIFEEEYLEQDVENVSIGLQTEARPSQGLPVIQSPPSSPPHRDSAYISSSPLGSHQVFDFRS
SSSVGSPTRQTYQSTSPALSPTHQNSHYRPSPPHTSPAHQGGSYRFSPPPVGGQGKEYPSPPPSPLRRGP
QYRASPPAESMSVYRSQSGSPVRYQQETSVSQLPGRPKSPLSKMAQRPYQMPQLPVAVPQQGLRLQPAKA
QIVRSNQPSPAVHSSTVIPTGAYGQVAHSMASKYQSSQGDIGVSQSRLVYQGSIGGIVGDGRPVQHVQAS
LSAGAICQHGGLTKEDLPQRPSSAYRGGVRYSQTPQIGRSQSASYYPVCHSKLDLERSSSQLGSPDVSHL
IRRPISVNPNEIKPHPPTPRPLLHSQSVGLRFSPSSNSISSTSNLTPTFRPSSSIQQMEIPLKPAYERSC
DELSPVSPTQGGYPSEPTRSRTTPFMGIIDKTARTQQYPHLHQQNRTWAVSSVDTVLSPTSPGNLPQPES
FSPPSSISNIAFYNKTNNAQNGHLLEDDYYSPHGMLANGSRGDLLERVSQASSYPDVKVARTLPVAQAYQ
DNLYRQLSRDSRQGQTSPIKPKRPFVESNV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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