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Report for CCDS84994.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84994.1 Public Mus musculus 5 Eif2ak1 23 108 98 CCDS HistoryNCBI Gene:15467Re-query CCDS DB by CCDS ID:84994.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84994.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100487.5 ENSMUSP00000098056.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100487.5Link to Ensembl Protein Viewer:ENSMUSP00000098056.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000100487Re-query CCDS DB by Protein ID:ENSMUSP00000098056
Original member NCBI NM_013557.2 NP_038585.2 Updated not alive Link to Nucleotide Sequence:NM_013557.2Link to Protein Sequence:NP_038585.2Re-query CCDS DB by Nucleotide ID:NM_013557Re-query CCDS DB by Protein ID:NP_038585
Current member NCBI NM_013557.3 NP_038585.2 Accepted alive Link to Nucleotide Sequence:NM_013557.3Link to Protein Sequence:NP_038585.2Re-query CCDS DB by Nucleotide ID:NM_013557Re-query CCDS DB by Protein ID:NP_038585Link to BLAST:NP_038585.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038585.2 619 Q9Z2R9 619 100% 0 0

Chromosomal Locations for CCDS 84994.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 143817891 143818008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143871863 143872021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143873751 143873884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143875660 143875697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143877576 143877675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143879435 143879515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143882153 143882252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143883973 143884030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143884656 143884980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143886850 143886961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143889396 143889496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143897165 143897276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143897475 143897557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143899014 143899247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 143901785 143901889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1860 nt):
ATGCTGGGGGGCAGCTCCGTGGACGGCGAGCGCGACACGGACGACGACGCGGCGGGGGCGGTGGCCGCGC
CTCCTGCCATCGACTTCCCCGCAGAGGTGTCGGACCCCAAGTATGATGAGTCCGATGTCCCCGCAGAGCT
CCAAGTGTTAAAAGAGCCCCTACAGCAGCCCACGTTCCCTTTCCTGGTGGCAAACCAGCTGCTGCTCGTC
TCCTTACTGGAACACTTGAGCCATGTGCACGAGCCAAACCCGCTCCACTCCAAACAGGTGTTTAAATTAC
TGTGCCAGACTTTTATCAAGATGGGGCTGCTCTCTTCCTTTACCTGCAGTGATGAGTTTAGCTCTCTGAG
ACTCCACCACAACAGAGCCATCACTCATTTAATGAGGTCTGCCAAAGAGAGAGTCCGTCAGGATCCTTGT
CAAGATAATTCTTACATGCAGAAAATCAGATCCAGAGAGATAGCCTTCGAAGCACAAACGTCACGCTACT
TAAATGAATTTGAAGAGCTTGCCATCTTAGGGAAAGGAGGATATGGAAGAGTTTACAAGGTCCGGAACAA
ATTAGATGGTCAGCATTATGCAATTAAGAAAATCCTGATTAAGAGCGCAACTAAAACAGATTGTATGAAG
GTGCTACGGGAAGTGAAGGTTCTGGCAGGTCTCCAGCATCCCAATATTGTTGGCTACCACACTGCGTGGA
TAGAACATGTTCATGTGGTTCAGCCACAAGACAGAGTTCCGATTCAACTGCCCTCTCTCGAAGTGCTGTC
GGAGCAGGAAGGGGACAGAGACCAAGGTGGTGTTAAAGATAATGAAAGCAGTTCGTCCATTGTCTTTGCT
GAACTCACCCCAGAAAAAGAAAAACCTTTTGGGGAGTCTGAGGTTAAAAATGAGAATAACAACCTGGTGA
GCTACACGGCCAACTTAGTGGTCAGGAACAGCAGTGAAAGTGAATCGTCCATTGAGCTCCAAGAAGACGG
CTTGACTGATTTGTCCGTCAGACCAGTTGTCAGGCATCAGCTGCCGCTGGGGCATAGCTCGGAATTGGAA
GGGAATTTTACATCCACGGATGAGTCTTCTGAAGGCAACTTGAACCTGCTGGGGCAGACGGAGGTTCGGT
ACCACCTGATGTTGCACATCCAGATGCAGCTGTGTGAGCTCTCCCTGTGGGACTGGATAACTGAGAGGAA
CAAGCGGAGCCGGGAGTATGTGGACGAAGCTGCTTGTCCCTATGTTATGGCCAGTGTTGCAACAAAAATT
TTTCAAGAATTGGTGGAAGGTGTCTTTTACATACATAACATGGGCATTGTCCACAGAGATCTGAAGCCTA
GAAATATTTTTCTTCATGGCCCTGATCAGCAAGTAAAAATAGGAGACTTTGGTCTGGCCTGTGCAGACAT
CATCCAGAATGCAGACTGGACCAACAGAAATGGGAAAGGAACACGGACACACACATCCAGAGTGGGGACT
TGTCTCTACGCATCACCGGAACAGCTGGAGGGATCCCAGTACGATGCCAAGTCAGATATGTATAGCTTGG
GTGTGATCCTGCTCGAGCTCTTTCAGCCATTCGGGACAGAAATGGAGAGGGCAACAGTCTTAACAGGCGT
AAGGACTGGTCGGATACCCGAATCCCTCAGTAAAAGGTGTCCGGTGCAAGCCAAGTATATCCAGCTCCTA
ACCGGGAGGAATGTGTCACAGAGACCATCTGCCCTTCAGCTGCTGCAGAGTGAGCTTTTTCAAACAACTG
GAAATGTTAATCTCACATTGCAGATGAAGATAATAGAACAAGAGAAGGAAATTGAAGAACTAAAGAAGCA
ACTAAGCCTCCTTTCTCAGGACAGAGGGCTGAAGAGATGA

Translation (619 aa):
MLGGSSVDGERDTDDDAAGAVAAPPAIDFPAEVSDPKYDESDVPAELQVLKEPLQQPTFPFLVANQLLLV
SLLEHLSHVHEPNPLHSKQVFKLLCQTFIKMGLLSSFTCSDEFSSLRLHHNRAITHLMRSAKERVRQDPC
QDNSYMQKIRSREIAFEAQTSRYLNEFEELAILGKGGYGRVYKVRNKLDGQHYAIKKILIKSATKTDCMK
VLREVKVLAGLQHPNIVGYHTAWIEHVHVVQPQDRVPIQLPSLEVLSEQEGDRDQGGVKDNESSSSIVFA
ELTPEKEKPFGESEVKNENNNLVSYTANLVVRNSSESESSIELQEDGLTDLSVRPVVRHQLPLGHSSELE
GNFTSTDESSEGNLNLLGQTEVRYHLMLHIQMQLCELSLWDWITERNKRSREYVDEAACPYVMASVATKI
FQELVEGVFYIHNMGIVHRDLKPRNIFLHGPDQQVKIGDFGLACADIIQNADWTNRNGKGTRTHTSRVGT
CLYASPEQLEGSQYDAKSDMYSLGVILLELFQPFGTEMERATVLTGVRTGRIPESLSKRCPVQAKYIQLL
TGRNVSQRPSALQLLQSELFQTTGNVNLTLQMKIIEQEKEIEELKKQLSLLSQDRGLKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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