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Report for CCDS9023.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9023.1 Public Homo sapiens 12 CCDC59 24 110 108 CCDS HistoryNCBI Gene:29080Re-query CCDS DB by CCDS ID:9023.1Re-query CCDS DB by GeneID:29080See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9023.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000256151.8 ENSP00000256151.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000256151.8Link to Ensembl Protein Viewer:ENSP00000256151.7Re-query CCDS DB by Nucleotide ID:ENST00000256151Re-query CCDS DB by Protein ID:ENSP00000256151
Original member Current member NCBI NM_014167.5 NP_054886.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014167.5Link to Protein Sequence:NP_054886.2Re-query CCDS DB by Nucleotide ID:NM_014167Re-query CCDS DB by Protein ID:NP_054886Link to BLAST:NP_054886.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_054886.2 241 Q9P031 241 100% 0 0

Chromosomal Locations for CCDS 9023.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 82353151 82353312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 82354495 82354594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 82356960 82357269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 82358223 82358376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (726 nt):
ATGGCGCCGGTGAGGCGGTCCGCGAAGTGGCGGCCTGGTGGTATTGAGGCGCGTGGTGAAGGGGTTTCCA
CTGTCGGGTACAGGAATAAGAATGTGAGACAGAAGACATGGCGGCCTAACCACCCGCAAGCCTTCGTGGG
GAGCGTTCGCGAGGGACAAGGCTTTGCTTTTCGAAGAAAACTGAAAATACAGCAAAGTTACAAGAAATTG
CTACGGAAGGAAAAGAAGGCTCAAACGTCACTGGAATCTCAATTCACAGATCGATACCCAGATAATCTGA
AACATCTCTATTTAGCTGAAGAGGAAAGACATAGGAAGCAAGCAAGAAAAGTCGACCATCCTTTGTCAGA
ACAAGTTCACCAGCCGTTGCTTGAAGAACAGTGTAGCATTGACGAGCCTTTATTTGAAGATCAGTGTAGC
TTTGACCAGCCTCAGCCAGAAGAACAATGTATTAAAACAGTAAACTCCTTTACAATTCCAAAGAAAAATA
AAAAGAAAACATCAAATCAAAAAGCACAAGAAGAATATGAACAGATACAAGCCAAACGTGCTGCTAAGAA
ACAAGAATTCGAGAGGAGAAAACAGGAGAGAGAAGAAGCCCAAAGGCAGTACAAAAAGAAGAAAATGGAA
GTGTTTAAAATACTGAACAAAAAGACTAAAAAGGGCCAACCAAACTTGAATGTACAAATGGAGTACCTTC
TTCAAAAAATACAAGAAAAATGTTAA

Translation (241 aa):
MAPVRRSAKWRPGGIEARGEGVSTVGYRNKNVRQKTWRPNHPQAFVGSVREGQGFAFRRKLKIQQSYKKL
LRKEKKAQTSLESQFTDRYPDNLKHLYLAEEERHRKQARKVDHPLSEQVHQPLLEEQCSIDEPLFEDQCS
FDQPQPEEQCIKTVNSFTIPKKNKKKTSNQKAQEEYEQIQAKRAAKKQEFERRKQEREEAQRQYKKKKME
VFKILNKKTKKGQPNLNVQMEYLLQKIQEKC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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