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Report for CCDS14718.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14718.1 Public Homo sapiens X PNMA5 24 110 108 CCDS HistoryNCBI Gene:114824Re-query CCDS DB by CCDS ID:14718.1Re-query CCDS DB by GeneID:114824See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14718.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361887.5 ENSP00000354834.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361887.5Link to Ensembl Protein Viewer:ENSP00000354834.5Re-query CCDS DB by Nucleotide ID:ENST00000361887Re-query CCDS DB by Protein ID:ENSP00000354834
Original member Current member EBI ENST00000439251.3 ENSP00000388850.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000439251.3Link to Ensembl Protein Viewer:ENSP00000388850.1Re-query CCDS DB by Nucleotide ID:ENST00000439251Re-query CCDS DB by Protein ID:ENSP00000388850
Original member Current member EBI ENST00000452693.5 ENSP00000392342.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000452693.5Link to Ensembl Protein Viewer:ENSP00000392342.1Re-query CCDS DB by Nucleotide ID:ENST00000452693Re-query CCDS DB by Protein ID:ENSP00000392342
Original member Current member EBI ENST00000535214.6 ENSP00000445775.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000535214.6Link to Ensembl Protein Viewer:ENSP00000445775.1Re-query CCDS DB by Nucleotide ID:ENST00000535214Re-query CCDS DB by Protein ID:ENSP00000445775
Original member Current member NCBI NM_001103150.1 NP_001096620.1 Accepted alive Link to Nucleotide Sequence:NM_001103150.1Link to Protein Sequence:NP_001096620.1Re-query CCDS DB by Nucleotide ID:NM_001103150Re-query CCDS DB by Protein ID:NP_001096620Link to BLAST:NP_001096620.1
Original member Current member NCBI NM_001103151.1 NP_001096621.1 Accepted alive Link to Nucleotide Sequence:NM_001103151.1Link to Protein Sequence:NP_001096621.1Re-query CCDS DB by Nucleotide ID:NM_001103151Re-query CCDS DB by Protein ID:NP_001096621Link to BLAST:NP_001096621.1
Original member Current member NCBI NM_001184924.2 NP_001171853.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001184924.2Link to Protein Sequence:NP_001171853.1Re-query CCDS DB by Nucleotide ID:NM_001184924Re-query CCDS DB by Protein ID:NP_001171853Link to BLAST:NP_001171853.1
Original member Current member NCBI NM_052926.3 NP_443158.1 Accepted alive Link to Nucleotide Sequence:NM_052926.3Link to Protein Sequence:NP_443158.1Re-query CCDS DB by Nucleotide ID:NM_052926Re-query CCDS DB by Protein ID:NP_443158Link to BLAST:NP_443158.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001096620.1 448 Q96PV4 448 100% 0 0
NP_001096621.1 448 Q96PV4 448 100% 0 0
NP_001171853.1 448 Q96PV4 448 100% 0 0
NP_443158.1 448 Q96PV4 448 100% 0 0

Chromosomal Locations for CCDS 14718.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 152990252 152991598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1347 nt):
ATGGCACTGACACTGCTAGAGGATTGGTGCAAGGGGATGGACATGGACCCCAGAAAGGCCCTGCTGATTG
TAGGCATCCCCATGGAGTGTAGTGAGGTGGAAATTCAGGACACTGTGAAGGCAGGCTTACAGCCCCTGTG
CGCATACAGGGTCCTAGGGAGAATGTTCAGGAGGGAAGACAATGCCAAGGCAGTCTTCATTGAACTGGCT
GACACTGTCAATTACACTACTCTGCCCAGTCACATACCAGGAAAGGGTGGCTCCTGGGAAGTGGTGGTAA
AACCCCGTAACCCAGATGATGAGTTTCTCAGTAGACTGAACTACTTCCTGAAAGATGAGGGCCGAAGTAT
GACAGATGTGGCCAGAGCCCTGGGATGTTGCAGCCTCCCTGCCGAGAGCCTGGATGCAGAGGTCATGCCC
CAAGTTAGATCCCCACCTTTAGAGCCTCCGAAAGAAAGTATGTGGTACAGGAAACTGAAAGTGTTTTCGG
GAACTGCTTCCCCTAGCCCAGGCGAAGAGACCTTTGAAGACTGGCTAGAGCAGGTCACTGAGATAATGCC
CATATGGCAAGTGTCTGAGGTGGAGAAGAGGCGGCGTTTGCTGGAGAGCTTACGTGGGCCTGCTCTGTCA
ATCATGCGGGTGCTCCAGGCCAACAATGACTCCATAACTGTGGAGCAGTGCCTTGACGCCCTAAAGCAGA
TCTTTGGGGATAAAGAGGACTTTAGAGCCTCTCAGTTTAGGTTTCTGCAGACCTCTCCGAAGATTGGAGA
GAAAGTCTCCACTTTCCTGCTGCGCTTAGAGCCCCTGCTGCAGAAAGCCGTGCACAAGAGCCCCTTGTCA
GTGCGCAGCACAGACATGATTCGTCTGAAACATCTCTTAGCTCGGGTCGCCATGACCCCCGCCCTCAGGG
GCAAGCTGGAGCTCTTGGATCAGCGAGGGTGTCCTCCCAATTTTCTGGAGTTAATGAAGCTCATTCGAGA
TGAAGAAGAGTGGGAGAACACTGAGGCAGTGATGAAGAATAAGGAGAAGCCATCAGGGAGAGGCCGGGGG
GCCTCCGGTAGACAGGCAAGAGCAGAAGCCAGTGTCTCTGCACCTCAGGCCACCGTGCAGGCAAGGTCTT
TTAGCGACAGCAGCCCCCAGACCATACAGGGAGGCTTACCCCCATTAGTGAAACGCAGGCGGCTGTTAGG
CAGTGAAAGCACTAGGGGAGAAGACCATGGCCAGGCCACGTATCCCAAGGCTGAAAACCAGACTCCAGGC
AGGGAGGGGCCACAGGCTGCAGGAGAGGAGTTGGGAAACGAGGCAGGGGCTGGGGCCATGAGCCATCCCA
AGCCCTGGGAAACATAG

Translation (448 aa):
MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMFRREDNAKAVFIELA
DTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRSMTDVARALGCCSLPAESLDAEVMP
QVRSPPLEPPKESMWYRKLKVFSGTASPSPGEETFEDWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALS
IMRVLQANNDSITVEQCLDALKQIFGDKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLS
VRSTDMIRLKHLLARVAMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRG
ASGRQARAEASVSAPQATVQARSFSDSSPQTIQGGLPPLVKRRRLLGSESTRGEDHGQATYPKAENQTPG
REGPQAAGEELGNEAGAGAMSHPKPWET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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