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Report for CCDS26434.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26434.1 Public Mus musculus 13 Serpinb9d 23 108 98 CCDS HistoryNCBI Gene:20726Re-query CCDS DB by CCDS ID:26434.1Re-query CCDS DB by GeneID:20726See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26434.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000067198.2 ENSMUSP00000067710.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000067198.2Link to Ensembl Protein Viewer:ENSMUSP00000067710.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000067198Re-query CCDS DB by Protein ID:ENSMUSP00000067710
Original member Current member NCBI NM_011460.3 NP_035590.1 Accepted alive Link to Nucleotide Sequence:NM_011460.3Link to Protein Sequence:NP_035590.1Re-query CCDS DB by Nucleotide ID:NM_011460Re-query CCDS DB by Protein ID:NP_035590Link to BLAST:NP_035590.1

Chromosomal Locations for CCDS 26434.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 33194573 33194740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33195848 33195988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33196442 33196559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33197977 33198119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33200612 33200767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33202677 33203084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1134 nt):
ATGAATACTCTGTCTCAAGCCAATGGCACCTTTGCCATCCATCTTTTGAAGGTGCTCTGTCAAGACAACC
CTTCAGAAAATGTGTGTTTTTCTCCTATGAGCATCTCCTCTGCCCTAGCTATGGTTCTCTTGGGTGCAAA
GGGAAACACTGTAACCCAGATATGTCAGGCACTTCATTTAAACCCAGATGAAGATGTCCATCAGGGCTTC
CAGTTGCTTCTCCATAACCTGAACAAGCCAAACAACCAAAAGTACTGCCTTACTATGGCCAACAGGCTCT
TTGTAGAAAATACTTGTGAATTACTTCCAACATTTAAGGAGTCCTGTCTTAAATTCTATCACTCTGAGAT
GGAGCAGCTCTCTTTTGCCGAAGCTGCCGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAG
ACTAATGGCAAAATCCCAGACTTACTGCCAAAAGACTCCATTGATTCACAGACCAGGCTGATTCTTGCCA
ATGCCTTATATTTCCAAGGAACATGGTATAAACTCTTTGAAAAAGATAGCACCAAGGAAATGCCCTTTAA
GATAAACAAGAAGGAAACAAGGCCAGTGCAGATGATGTGGCAGGAAGACAGATTTTACCATGCCTATGTG
AAGGAAATCCAGGCACAAGTGCTGGTGATGCCCTATGAGGGCATAGATTTGAGTTTCGTGGTCCTACTCC
CAGATAAGGGTGTGGACATCAGCAAGGTGGAAAACAATCTCACTTTTGAGAAGTTAACAGCCTGGACCAA
ACCAGACTTTATGAATGGCATCGAGCTTCATGTTTATCTTCCAAAATTTCAACTACAAGAGGATTATGAT
ATGAATTCCCTGTTACAGCATTTGGGAATTTTGGATGTCTTTGATGGAAGCAAGGCTGACTTATCAGGAA
TGTCTACTAAGGAAAACCTGTGTCTGTCCAACTTTGTTCACAAGTGTGTAGTAGAGGTCAATGAAGAAGG
AACAGAGGCTGCTGCAGCCACTGCTGGCAAAACTATACAGTGCTGTTTAGGTTCTTATCCCCAAACTTTC
TGTGCTGACCACCCTTTCCTTTTCTTCATCATGCACAGCACAACTAACAGCATCCTGTTCTGTGGCAGAT
TCTCATCTCCATAA

Translation (377 aa):
MNTLSQANGTFAIHLLKVLCQDNPSENVCFSPMSISSALAMVLLGAKGNTVTQICQALHLNPDEDVHQGF
QLLLHNLNKPNNQKYCLTMANRLFVENTCELLPTFKESCLKFYHSEMEQLSFAEAAEESRQHINMWVSKQ
TNGKIPDLLPKDSIDSQTRLILANALYFQGTWYKLFEKDSTKEMPFKINKKETRPVQMMWQEDRFYHAYV
KEIQAQVLVMPYEGIDLSFVVLLPDKGVDISKVENNLTFEKLTAWTKPDFMNGIELHVYLPKFQLQEDYD
MNSLLQHLGILDVFDGSKADLSGMSTKENLCLSNFVHKCVVEVNEEGTEAAAATAGKTIQCCLGSYPQTF
CADHPFLFFIMHSTTNSILFCGRFSSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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