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Report for CCDS50432.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50432.1 Public Mus musculus 19 Cyp2c69 23 108 98 CCDS HistoryNCBI Gene:100043108Re-query CCDS DB by CCDS ID:50432.1Re-query CCDS DB by GeneID:100043108See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 50432.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000168838.2 ENSMUSP00000132832.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168838.2Link to Ensembl Protein Viewer:ENSMUSP00000132832.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000168838Re-query CCDS DB by Protein ID:ENSMUSP00000132832
Original member Current member NCBI NM_001104525.1 NP_001097995.1 Accepted alive Link to Nucleotide Sequence:NM_001104525.1Link to Protein Sequence:NP_001097995.1Re-query CCDS DB by Nucleotide ID:NM_001104525Re-query CCDS DB by Protein ID:NP_001097995Link to BLAST:NP_001097995.1

Chromosomal Locations for CCDS 50432.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 39842892 39843076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39849346 39849487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39851029 39851216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39859816 39859957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39876214 39876390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39877506 39877666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39881093 39881242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39881446 39881608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39886540 39886707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1476 nt):
ATGGATCCATTTGTAGTCTTGGTGCTTTGTCTGTCCTTTATGCTTCTCCTGTCATTGTGGAGACAGAGAT
CTGCAAGACGGAACCTCCCTCCTGGCCCTACTCCTCTCCCAATTATTGGAAATTACCACCTGATAGATAT
GAAGGACATTGGGCAGTGCCTTACCAATTTTTCTAAAACATATGGCCCTGTGTTCACTCTGTATTTTGGC
TCACAGCCTATTGTGGTATTACATGGTTATGAGGCAATTAAAGAAGCCCTCATTGACCATGGAGAAGTGT
TCTCTGGAAGAGGAAGTTTTCCGTTTTTTGACAAGGTTTCTAAAGGAAAGGGCATTGGTTTTAGCCATGG
AAATGTATGGAAAGCCACAAGGGTCTTCACAGTGAATACCTTGAGGAACTTGGCCATGGGAAAAAGGACC
ATTGAGAACAAAGTGCAAGAGGAAGCACAGTGGCTCATGAAGGAACTGAAGAAAACAAATGGCTCACCCT
GTGATCCCCAATTCATCATAGGATGTGCTCCCTGCAATGTCATCTGCTCCATTGTTTTCCAGAATCGTTT
CGATTATAAGGATAAGGATTTTCTTAGCTTGATAGGAAAAGTGAATGAATGCACTGAAATTTTGAGCTCT
CCTGGGTGTCAGATTTTCAATGCAGTCCCTATTCTTATTGATTATTGTCCAGGAAGGCATAATAAATTTT
TTAAAAATCATACATGGATTAAGAGCTATCTTTTGGAGAAAATAAAAGAACATGAAGAATCATTGGATGT
TACAAATCCTCGGGACTTCATCGATTACTTCCTAATTCAAAGACGTCAGGATAAAGGCATTGAGCACATG
GAATATACCATTGAACACCTGGCAACATTGGTGACTGATCTGGTTTTTGGTGGGACAGAGACCTTAAGCT
CAACGATGAGATTTGCTCTCCTGCTCTTGATGAAGCACACACACATCACAGCTAAAGTCCAGGAAGAGAT
TGACAATGTGATTGGGAGACACCGCAGCCCCTGTATGCAGGACAGGAAACATATGCCTTACACAAATGCC
ATGGTGCATGAGGTCCAACGATACGTTGACCTTGGCCCAACTAGTTTGGTGCATGAAGTAACCTGTGACA
CTAAGTTCAGAAACTACTTCATCCCCAAGGGAACACAGGTAATGACATCACTGTCATCAGTGCTGCATGA
CAGCACGGAGTTCCCCAACCCAGAGGTGTTTGACCCTGGCCACTTTCTAGATGACAATGGAAACTTTAAG
AAAAGTGACTACTTCGTGCCTTTCTCAGCAGGAAAACGGATTTGTGTGGGAGAGAGCCTTGCCCGCATGG
AGCTGTTTCTATTCCTGACCACCATTTTACAAAATTTCAAACTGAAACCTCTGGTTGATCCAAAGGACAT
CGATACGACCCCCAAATATTCTGGATTTTCTAAAATTCCTCCCAAATTCCAGATGTGCTTCATCCCTGTG
GAATGA

Translation (491 aa):
MDPFVVLVLCLSFMLLLSLWRQRSARRNLPPGPTPLPIIGNYHLIDMKDIGQCLTNFSKTYGPVFTLYFG
SQPIVVLHGYEAIKEALIDHGEVFSGRGSFPFFDKVSKGKGIGFSHGNVWKATRVFTVNTLRNLAMGKRT
IENKVQEEAQWLMKELKKTNGSPCDPQFIIGCAPCNVICSIVFQNRFDYKDKDFLSLIGKVNECTEILSS
PGCQIFNAVPILIDYCPGRHNKFFKNHTWIKSYLLEKIKEHEESLDVTNPRDFIDYFLIQRRQDKGIEHM
EYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRHRSPCMQDRKHMPYTNA
MVHEVQRYVDLGPTSLVHEVTCDTKFRNYFIPKGTQVMTSLSSVLHDSTEFPNPEVFDPGHFLDDNGNFK
KSDYFVPFSAGKRICVGESLARMELFLFLTTILQNFKLKPLVDPKDIDTTPKYSGFSKIPPKFQMCFIPV
E


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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