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Report for CCDS37631.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37631.1 Public Mus musculus 17 Xpo5 23 108 98 CCDS HistoryNCBI Gene:72322Re-query CCDS DB by CCDS ID:37631.1Re-query CCDS DB by GeneID:72322See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37631.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000087031.6 ENSMUSP00000084257.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000087031.6Link to Ensembl Protein Viewer:ENSMUSP00000084257.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000087031Re-query CCDS DB by Protein ID:ENSMUSP00000084257
Original member Current member NCBI NM_028198.3 NP_082474.1 Accepted alive Link to Nucleotide Sequence:NM_028198.3Link to Protein Sequence:NP_082474.1Re-query CCDS DB by Nucleotide ID:NM_028198Re-query CCDS DB by Protein ID:NP_082474Link to BLAST:NP_082474.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082474.1 1204 Q924C1-1 1204 100% 0 0

Chromosomal Locations for CCDS 37631.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 46202921 46203025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46204655 46204776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46206487 46206559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46207779 46207916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46208075 46208257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46214190 46214216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46214577 46214762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46215732 46215808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46217582 46217681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46218545 46218628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46219391 46219516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46220761 46220851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46221353 46221481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46222661 46222791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46225016 46225171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46226413 46226454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46226919 46227008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46227730 46227929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46229312 46229411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46230199 46230380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46233718 46233818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46234453 46234549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46235865 46236001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46236913 46237010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46238373 46238419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46238890 46238987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46239514 46239576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46240158 46240240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46240815 46240922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46241417 46241554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46241726 46241890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46242134 46242271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3615 nt):
ATGGAGATGGAGCAAGTGAACGCGCTGTGCGAGGAGCTAGTGAAAGCGGTGACGGTCATGATGGACCCCA
GCTCTACCCAGCGCTACCGGCTGGAAGCCCTCAAGTTTTGTGAAGAGTTTAAAGAAAAATGCCCTATCTG
TGTTCCATGTGGCTTGAAGTTGGCTGAAAAAACACAAATTGCCATCGTCAGACATTTTGGCCTTCAGATC
CTGGAGCATGTTGTCAAGTTTCGATGGAACAGCATGTCCCGATTGGAGAAGGTCTATCTGAAGAACAGTG
TCATGGAGCTGATCGCAAATGGAACACTGAGGATTTTGGAGGAGGAGAACCACATTAAAGATGTTCTGTC
TAGAATTGTGGTAGAGATGATCAAACGAGAGTGGCCACAGCACTGGCCTGACATGCTCATGGAGTTGGAT
ACTCTCTTCAGGCAAGGGGAAACGCAGAGGGAGTTGGTGATGTTCATCCTTCTCCGACTGGCCGAGGATG
TAGTGACCTTTCAGACGCTCCCCACTCAAAGAAGAAGGGATATTCAGCAAACATTGACGCAGAACATGGA
AAGAATCTTGAATTTTCTACTCAATACGCTTCAGGAAAATGTAAACAAGTACCAACAAATGAAGACAGAT
TCATCTCAGGAGGCAGAGGCTCAAGCCAACTGTCGAGTAAGCGTGGCGGCCCTGAACACTCTAGCCGGCT
ACATTGACTGGGTATCTTTGAACCATATCACTGCCGAGAACTGTAAACTCGTGGAGACTCTGTGCCTGCT
TCTCAATGAGCAGGAGCTGCAGTTGGGAGCCGCCGAGTGTCTGCTCATTGCAGTCAGCAGAAAAGGCAAG
CTGGAGGACCGGAAGCGCTTGATGATCCTGTTTGGAGATGTCGCCATGCATTATATTCTCTCGGCCGCAC
AGACTGCAGATGGAGGAGGCTTGGTCGAAAAACACTACCTCTTCCTGAAGAGACTTTGTCAGGTGTTATG
TGCACTGGGAAATCTGCTATGTGCACTGCTGGCCTTAGATGCTAACATACAAACACCTATAAACTTTGGA
ATGTACCTGGAATCTTTTCTTGCTTTCACAACCCATCCAAGTCAGTTTTTACGCTCTTCAACCCATATGA
CGTGGGGAGCCCTCTTCAGGCATGAAGTTCTGTCCCGTGATCCGGCACTGTTAGCAGTAATACCAAAATA
TCTTCGTGCTTCTATGACAAACTTGGTCAAGATGGGCTTTCCTTCTAAAACAGATAGCCCCAGCTGTGAA
TATTCCCGATTTGATTTCGATAGTGATGAGGACTTCAATGCTTTCTTCAACTCCTCCCGAGCCCAGCATG
GAGAGGTGGTGAGGTGTGTGTGTCGACTGGATCCTAAGACTAGCTTCCAGATGGCGGCAGAATGGCTCAA
GTATCAGCTGTCAGCTTCTATTGACACTGGACCTGTGAACTCATGTTCTACAGCTGGAACTGGAGAGGGA
GGCTTCTGCTCCATCTTCTCACCTTCATATGTGCAGTGGGAAGCTATGACTTTTTTTTTGGAAAGTGTGA
TCAACCAGATGTTTCGAACACTAGACAAAGAAGAGCTCCCGGTTAGTGATGGGATAGAGCTGCTGCAGCT
GGTGTTGAACTTTGAAATCAAGGATCCCCTCGTCCTGTCCTGCGTCCTCACTAATGTCTCAGCGCTCTTC
CCATTTGTCACATACAAGCCTGCGTTCTTGCCCCAGGTCTTCTCTAAGCTCTTTTCATTTGTTACTTTTG
AATCTGTTGGGGAAAGTAAGGCCCCCAGGACTCGGGCAGTCAGGAATGTAAGGAGACATGCTTGTTCCTC
CATCAACAAGATGTGTCGGGACTACCCAGACCTTGTTCTGCCCAATTTTGACATGCTTTATAGCCACGTG
AAGCAACTCCTCTCCAATGAGCTCCTCCTGACCCAGATGGAGAAGTGCGCCCTCATGGAAGCTCTGGTTC
TCGTTAGCAACCAATTCAAGGATTATGAGCGGCAGAAGTTATTCCTAGAGGAGCTGATGGCACCGGTGGT
CAACATCTGGCTTTCTGAAGAAATGTGCAGAGCGCTGTCAGATATTGACTCCTTCATTGCCTATGTGGGT
GCTGATCTGAAAAGCTGTGACCCAGCTGTGGAGGATCCATGTGGCTTGAACCGTGCACGAATGAGCTTTT
GTGTGTACAGCATCCTGGGGGTTATGAGACGCACTAGCTGGCCTTCCGACCTAGAAGAAGCCAAAGCTGG
GGGCTTTGTGGTGGGCTACACACCCAGTGGAAATCCCATCTTCCGTAACCCCTGCACAGAGCAGATCCTC
AGACTTCTCGACAATTTGCTTGCCCTTGTAAGAACTCACAATACTTTATATACACCGGAAATGCTAACGA
AAATGGCAGAACCTTTCACCAAGGCTCTGGATATAGTTGAATCTGAAAAAACGGCAATATTAGGATTACC
TCAGCCTCTCTTGGAATTCAACGACCACCCTGTCTATAGAACCACTCTGGAGAGGATGCAGCGGTTCTTT
GGCATTCTCTATGAAAACTGTTACCATATCCTAGGGAAGGCAGGCCCTTCCATGCAGCAAGATTTCTACA
CTGTGGAGGACCTTGCTTCCCAGCTCCTTGGATCAGCTTTCGTCAACTTGAACAATATTCCTGACTTCCG
GCTTAGATCTATGCTTCGTGTCTTCGTGAAGCCCCTCGTGCTCTTCTGCCCCTCAGAACACTATGAAACC
CTGATATCTCCCATCCTTGGACCTCTCTTCACCTACCTCCACATGAGGCTCTCTCAGAAGTGGCATGTCA
TCAACCAGAGGAGCATCCTGTGTGGAGAAGATGAGATTGCAGAGGACAACCCCGAGTCTCAGGAAATGCT
CGAGGAACAGCTGGTGAGGATGCTCACCCGAGAAGCCATGGACCTAATCATGGCTTGCTGTGTGTCGAAG
AAGACTGCCGACCACACAGCCGCTCCCACTGCAGATGGAGATGATGAAGAGATGATGGCCACTGAAGTAG
CCCCCTCGTCTGTGGTGGAGCTCACAGACCTGGGCAAATGCCTCATGAAGCACGAGGATGTCTGCACAGC
ACTGCTAATCACAGCATTTAATTCTCTGACCTGGAAGGACACACTGTCTTGCCAGAGGGCTACCACACAG
CTCTGCTGGCCCCTCCTCAAACAGGTGATGTCTGGGACCCTGCTCGCAGACGCTGTCACTTGGCTTTTCA
CCAGTGTGCTGAAAGGACTGCAGATGCACGGGCAGCACGATGGGTGCATGGCTTCCCTGGTCCACTTGGC
CTTCCAGATATACGAGGCGCTGCGCCCCAGGTACCTAGAGATAAGAGCAGTAATGGAGCAGATCCCTGAA
ATAAACAAGGAGTCTCTGGACCAATTTGACTGCAAGCTTTTAAACCCCTCCCTTCAAAAAGCAGCTGATA
AACGACGGAAGGACCACTTCAAACGTCTAATCGCTGGCTGCATTGGGAAACCCTTGGGAGAACAGTTCCG
AAAAGAAGTTCACATTAAGAACCTTCCCTGGCTTTTCAAAAAACCCAAACCAATGTTGGAGACAGAAGTG
CTGGACAGTGAGGAGGGTGGACTGGCCACCATCTTTGAACCCTGA

Translation (1204 aa):
MEMEQVNALCEELVKAVTVMMDPSSTQRYRLEALKFCEEFKEKCPICVPCGLKLAEKTQIAIVRHFGLQI
LEHVVKFRWNSMSRLEKVYLKNSVMELIANGTLRILEEENHIKDVLSRIVVEMIKREWPQHWPDMLMELD
TLFRQGETQRELVMFILLRLAEDVVTFQTLPTQRRRDIQQTLTQNMERILNFLLNTLQENVNKYQQMKTD
SSQEAEAQANCRVSVAALNTLAGYIDWVSLNHITAENCKLVETLCLLLNEQELQLGAAECLLIAVSRKGK
LEDRKRLMILFGDVAMHYILSAAQTADGGGLVEKHYLFLKRLCQVLCALGNLLCALLALDANIQTPINFG
MYLESFLAFTTHPSQFLRSSTHMTWGALFRHEVLSRDPALLAVIPKYLRASMTNLVKMGFPSKTDSPSCE
YSRFDFDSDEDFNAFFNSSRAQHGEVVRCVCRLDPKTSFQMAAEWLKYQLSASIDTGPVNSCSTAGTGEG
GFCSIFSPSYVQWEAMTFFLESVINQMFRTLDKEELPVSDGIELLQLVLNFEIKDPLVLSCVLTNVSALF
PFVTYKPAFLPQVFSKLFSFVTFESVGESKAPRTRAVRNVRRHACSSINKMCRDYPDLVLPNFDMLYSHV
KQLLSNELLLTQMEKCALMEALVLVSNQFKDYERQKLFLEELMAPVVNIWLSEEMCRALSDIDSFIAYVG
ADLKSCDPAVEDPCGLNRARMSFCVYSILGVMRRTSWPSDLEEAKAGGFVVGYTPSGNPIFRNPCTEQIL
RLLDNLLALVRTHNTLYTPEMLTKMAEPFTKALDIVESEKTAILGLPQPLLEFNDHPVYRTTLERMQRFF
GILYENCYHILGKAGPSMQQDFYTVEDLASQLLGSAFVNLNNIPDFRLRSMLRVFVKPLVLFCPSEHYET
LISPILGPLFTYLHMRLSQKWHVINQRSILCGEDEIAEDNPESQEMLEEQLVRMLTREAMDLIMACCVSK
KTADHTAAPTADGDDEEMMATEVAPSSVVELTDLGKCLMKHEDVCTALLITAFNSLTWKDTLSCQRATTQ
LCWPLLKQVMSGTLLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLAFQIYEALRPRYLEIRAVMEQIPE
INKESLDQFDCKLLNPSLQKAADKRRKDHFKRLIAGCIGKPLGEQFRKEVHIKNLPWLFKKPKPMLETEV
LDSEEGGLATIFEP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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