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Report for CCDS6348.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6348.1 Public Homo sapiens 8 TMEM65 24 110 108 CCDS HistoryNCBI Gene:157378Re-query CCDS DB by CCDS ID:6348.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6348.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297632.8 ENSP00000297632.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000297632.8Link to Ensembl Protein Viewer:ENSP00000297632.6Re-query CCDS DB by Nucleotide ID:ENST00000297632Re-query CCDS DB by Protein ID:ENSP00000297632
Original member Current member NCBI NM_194291.3 NP_919267.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_194291.3Link to Protein Sequence:NP_919267.2Re-query CCDS DB by Nucleotide ID:NM_194291Re-query CCDS DB by Protein ID:NP_919267Link to BLAST:NP_919267.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_919267.2 240 Q6PI78 240 100% 0 0

Chromosomal Locations for CCDS 6348.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 124313960 124314061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124320086 124320191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124322105 124322147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124323321 124323375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124327354 124327421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124330748 124330792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124371854 124372157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (723 nt):
ATGTCCCGGCTGCTGCCGCTGCTGAGGAGCCGGACCGCGCGCAGCCTGAGGCCGGGCCCGGCCGCCGCCG
CCGCGCCCCGCCCGCCGTCCTGGTGCTGCTGCGGGCGGGGGCTGCTGGCGCTCGCGCCCCCCGGCGGCTT
GCCGGGCGGCCCCAGGCGGCTGGGCACGCACCCCAAGAAGGAGCCCATGGAGGCGCTGAACACGGCGCAG
GGCGCGCGCGACTTCATCTACAGCCTGCACTCCACGGAGAGGAGCTGCCTGCTCAAAGAGCTGCACCGCT
TCGAGTCTATTGCCATTGCCCAAGAAAAATTGGAAGCTCCACCACCCACCCCAGGACAGCTGAGATATGT
ATTCATCCACAATGCGATACCTTTCATAGGGTTTGGCTTTTTGGATAATGCAATTATGATTGTTGCTGGA
ACCCATATTGAAATGTCTATTGGAATTATTTTGGGAATTTCAACTATGGCAGCTGCTGCTTTGGGAAATC
TTGTGTCAGATCTAGCTGGACTTGGACTTGCAGGCTACGTTGAAGCATTGGCTTCCAGGTTAGGCCTGTC
AATTCCTGATCTCACACCAAAGCAAGTTGACATGTGGCAAACACGTCTTAGTACACATTTGGGCAAAGCT
GTTGGGGTGACTATTGGCTGCATTCTAGGAATGTTTCCTTTAATTTTCTTTGGAGGAGGTGAAGAAGATG
AAAAACTGGAAACGAAAAGTTAA

Translation (240 aa):
MSRLLPLLRSRTARSLRPGPAAAAAPRPPSWCCCGRGLLALAPPGGLPGGPRRLGTHPKKEPMEALNTAQ
GARDFIYSLHSTERSCLLKELHRFESIAIAQEKLEAPPPTPGQLRYVFIHNAIPFIGFGFLDNAIMIVAG
THIEMSIGIILGISTMAAAALGNLVSDLAGLGLAGYVEALASRLGLSIPDLTPKQVDMWQTRLSTHLGKA
VGVTIGCILGMFPLIFFGGGEEDEKLETKS


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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