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Report for CCDS6662.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6662.1 Public Homo sapiens 9 RASEF 24 110 108 CCDS HistoryNCBI Gene:158158Re-query CCDS DB by CCDS ID:6662.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6662.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376447.4 ENSP00000365630.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376447.4Link to Ensembl Protein Viewer:ENSP00000365630.3Re-query CCDS DB by Nucleotide ID:ENST00000376447Re-query CCDS DB by Protein ID:ENSP00000365630
Original member Current member NCBI NM_152573.4 NP_689786.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152573.4Link to Protein Sequence:NP_689786.2Re-query CCDS DB by Nucleotide ID:NM_152573Re-query CCDS DB by Protein ID:NP_689786Link to BLAST:NP_689786.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689786.2 740 Q8IZ41-1 740 100% 0 0

Chromosomal Locations for CCDS 6662.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 82982677 82982782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 82990391 82990467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 82992906 82993025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 82997012 82997126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 82998365 82998446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83000169 83000316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83000433 83000570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83000896 83001130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83004498 83004586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83005416 83005500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83007437 83007505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83009641 83009756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83012434 83012511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83015805 83015900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83022336 83022426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83025775 83025921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83062437 83062867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2223 nt):
ATGGAGGCGGATGGGGACGGAGAGGAGCTGGCCCGGCTGCGCTCAGTCTTCGCCGCCTGCGACGCGAACC
GCTCGGGGCGCCTGGAGCGCGAGGAGTTCCGGGCACTGTGCACGGAGCTGCGGGTGCGGCCGGCCGACGC
CGAGGCAGTATTCCAGCGGCTGGACGCCGACCGTGACGGCGCCATCACCTTCCAGGAGTTCGCGCGTGGC
TTCCTCGGGTCCCTCCGCGGGGGGCGGCGCCGGGACTGGGGTCCTCTGGATCCCGCGCCCGCCGTGTCTG
AGGCGGGGCCGGAGACACACGACAGCGAGGAGGACGAAGGCGACGAGGACGCGGCGGCGGCGCTGGCCAC
CTCGTGCGGCCCGGCGAGTCCCGGCCGGGCTTGGCAGGATTTCCAGGCGCGACTTGGGGACGAAGCCAAG
TTCATTCCCAGAGAAGAGCAAGTTAGTACCTTGTACCAAAACATCAACCTTGTGGAGCCAAGATTAATTC
AGCCATATGAACATGTTATAAAGAACTTCATCCGTGAGATCAGACTTCAAAGCACAGAAATGGAAAATTT
GGCCATTGCGGTGAAGAGAGCCCAGGACAAGGCAGCTATGCAGTTGAGTGAGTTGGAAGAGGAAATGGAT
CAGAGGATTCAGGCTGCAGAACATAAGACACGGAAAGACGAAAAACGCAAAGCTGAGGAAGCCCTCAGTG
ACCTCAGACGTCAGTATGAAACTGAAGTAGGAGATCTGCAGGTGACCATTAAAAAGCTAAGAAAGCTCGA
AGAACAATCAAAACGCGTAAGTCAAAAGGAAGATGTGGCTGCATTGAAAAAACAAATTTATGATTTATCA
ATGGAAAACCAGAAAGTTAAGAAAGACCTTTTAGAAGCACAGACAAACATAGCCTTTCTTCAGAGTGAGT
TAGATGCTTTGAAAAGTGATTATGCTGATCAGAGTCTGAATACTGAAAGGGATCTGGAAATAATCCGAGC
ATACACAGAAGATCGAAATAGTCTTGAGAGGCAAATTGAAATACTCCAAACAGCTAACCGGAAGCTACAT
GACAGTAATGATGGCCTTAGAAGTGCCCTTGAAAACAGTTATAGCAAGTTCAACAGATCTTTGCATATAA
ATAATATCTCACCAGGGAATACAATTTCTAGAAGCAGTCCCAAATTCATTGGTCATTCCCCTCAACCTCT
AGGCTATGACAGGTCATCCCGCTCTTCCTATGTGGATGAGGACTGTGACTCCCTGGCCCTCTGTGATCCT
CTGCAGAGGACAAATTGTGAAGTTGACAGCCTGCCTGAAAGCTGCTTCGACAGCGGCTTGTCTACCTTGA
GAGATCCCAATGAGTATGACTCAGAAGTGGAATACAAGCACCAGAGGGGATTTCAGAGGTCACACGGGGT
GCAGGAGAGCTTTGGAGGTGATGCTTCAGACACAGATGTTCCTGACATAAGGGATGAAGAGACATTTGGT
TTAGAAGATGTGGCTTCCGTCTTAGACTGGAAGCCCCAAGGGTCTGTTAGTGAAGGCAGCATTGTTAGTT
CATCAAGAAAGCCCATCTCAGCACTCTCGCCCCAGACAGACCTGGTAGATGACAACGCTAAATCTTTTAG
CTCACAGAAGGCTTACAAGATTGTACTTGCTGGGGACGCTGCAGTGGGGAAGTCTAGTTTCCTCATGAGA
CTTTGCAAGAATGAATTTCGAGAAAATATAAGCGCCACCCTGGGAGTTGATTTCCAAATGAAAACCCTCA
TTGTGGATGGAGAACGAACAGTTCTGCAGCTCTGGGATACAGCTGGTCAGGAGAGATTCAGAAGTATTGC
CAAGTCTTACTTCAGAAAGGCAGATGGTGTTTTGCTGCTGTATGATGTTACATGTGAGAAAAGCTTTCTT
AACATACGAGAATGGGTAGATATGATTGAGGATGCAGCCCATGAGACTGTTCCCATTATGCTGGTAGGAA
ACAAGGCTGACATTCGTGACACTGCTGCTACAGAGGGACAAAAATGTGTCCCAGGGCACTTTGGAGAGAA
ACTGGCCATGACGTATGGGGCATTATTCTGTGAAACAAGTGCCAAAGATGGTTCTAACATAGTGGAGGCT
GTTCTGCACCTTGCTCGAGAAGTGAAAAAGAGAACTGACAAGGATGACAGCAGATCCATTACCAATCTAA
CCGGGACCAATTCCAAAAAGTCACCACAGATGAAGAATTGTTGCAATGGCTAA

Translation (740 aa):
MEADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEFARG
FLGSLRGGRRRDWGPLDPAPAVSEAGPETHDSEEDEGDEDAAAALATSCGPASPGRAWQDFQARLGDEAK
FIPREEQVSTLYQNINLVEPRLIQPYEHVIKNFIREIRLQSTEMENLAIAVKRAQDKAAMQLSELEEEMD
QRIQAAEHKTRKDEKRKAEEALSDLRRQYETEVGDLQVTIKKLRKLEEQSKRVSQKEDVAALKKQIYDLS
MENQKVKKDLLEAQTNIAFLQSELDALKSDYADQSLNTERDLEIIRAYTEDRNSLERQIEILQTANRKLH
DSNDGLRSALENSYSKFNRSLHINNISPGNTISRSSPKFIGHSPQPLGYDRSSRSSYVDEDCDSLALCDP
LQRTNCEVDSLPESCFDSGLSTLRDPNEYDSEVEYKHQRGFQRSHGVQESFGGDASDTDVPDIRDEETFG
LEDVASVLDWKPQGSVSEGSIVSSSRKPISALSPQTDLVDDNAKSFSSQKAYKIVLAGDAAVGKSSFLMR
LCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFL
NIREWVDMIEDAAHETVPIMLVGNKADIRDTAATEGQKCVPGHFGEKLAMTYGALFCETSAKDGSNIVEA
VLHLAREVKKRTDKDDSRSITNLTGTNSKKSPQMKNCCNG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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