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Report for CCDS50600.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50600.1 Public Mus musculus 2 Mettl8 23 108 98 CCDS HistoryNCBI Gene:228019Re-query CCDS DB by CCDS ID:50600.1Re-query CCDS DB by GeneID:228019See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50600.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112186.8 ENSMUSP00000107804.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112186.8Link to Ensembl Protein Viewer:ENSMUSP00000107804.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000112186Re-query CCDS DB by Protein ID:ENSMUSP00000107804
Original member NCBI NM_145524.3 NP_663499.2 Updated not alive Link to Nucleotide Sequence:NM_145524.3Link to Protein Sequence:NP_663499.2Re-query CCDS DB by Nucleotide ID:NM_145524Re-query CCDS DB by Protein ID:NP_663499
Current member NCBI NM_145524.4 NP_663499.2 Accepted alive Link to Nucleotide Sequence:NM_145524.4Link to Protein Sequence:NP_663499.2Re-query CCDS DB by Nucleotide ID:NM_145524Re-query CCDS DB by Protein ID:NP_663499Link to BLAST:NP_663499.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663499.2 388 A2AUU0-3 388 100% 0 0

Chromosomal Locations for CCDS 50600.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 70965516 70965679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70966448 70966513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70967050 70967156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70973253 70973392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70976074 70976137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70980377 70980426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70981855 70982195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 70993484 70993575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71018220 71018362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1167 nt):
ATGAATGTGATTTGGAGAAGTTGCATTTGCCGACTGAGGCAGGGGAAGGTACCACACCGATGCCAGAGTG
GCGTCCACCCGGTAGCCCCTCTGGGGTCGAGGATTTTAACTGACCCCGCCAAAGTTTTTGAACACAACAT
GTGGGATCACATGCAGTGGTCTAAAGAAGAAGAAGACGCAGCTAGAAAAAAGGTAGAGGAAAACTCAGCC
ACACGAGTCGCTCCAGAAGAGCAAGTTAAGTTTGAAAGTGACGCTAACAAATACTGGGATATATTTTACC
AGACCCATAAGAATAAGTTTTTCAAGAATCGTAATTGGCTGTTGAGGGAATTTCCTGAAATCCTTCCTGT
TAATCAAAACACTAAAGAGAAAGTGGGAGAATCATCCTGGGATCAAGTCGGAAGCAGCATCTCTAGGACA
CAAGGAACAGAAACCCATTGTCAAGAGAGTTTTGTCTCGCCAGAACCTGGGAGCAGAGGACGGTCTGCTC
CTGACCCCGACTTGGAAGAATACAGCAAAGGACCTGGGAAGACAGAGCCGTTTCCTGGTAGCAATGCCAC
TTTTCGAATACTAGAGGTTGGCTGTGGTGCTGGAAATAGCGTGTTTCCAATCCTGAACACCTTGCAGAAC
ATTCCAGGATCCTTTCTCTACTGCTGCGACTTTGCCTCTGAAGCTGTGGAACTTGTAAAGTCCCACGAGT
CCTACAGCGAGGCCCAGTGTTCTGCCTTTATTCATGACGTGTGTGACGACGGCTTAGCCTACCCTTTCCC
AGATGGGATCCTGGATGTCGTTCTCCTTGTCTTTGTGCTCTCATCTATCCACCCTGACAGGATGCAAGCT
GTTGCCCACCGACTGTCCAGGTTGCTGAAGCCCGGAGGAATGCTATTGTTTCGGGATCATGGAAGATACG
ATAATGCTCAGCTTCGTTTTAAGAAAGGGCGTTGTTTATCTGAAAATTTTTATGTCCGAGGAGATGGTAC
CAGAGCTTATTTCTTTACAAAAGGGGAAATCCGCCGTATGTTCTGCGAGGCTGGATTACACGAAAAGCAA
AATCTGGTTGATCATCGCTTGCAAGTGAACAGGAAAAAGCAAGTGCAGATGCACCGAGTGTGGATTCAAG
GAAAATTCCAGAAACCATCGCCCTGGACTCCACAGAGTGGAAATTAG

Translation (388 aa):
MNVIWRSCICRLRQGKVPHRCQSGVHPVAPLGSRILTDPAKVFEHNMWDHMQWSKEEEDAARKKVEENSA
TRVAPEEQVKFESDANKYWDIFYQTHKNKFFKNRNWLLREFPEILPVNQNTKEKVGESSWDQVGSSISRT
QGTETHCQESFVSPEPGSRGRSAPDPDLEEYSKGPGKTEPFPGSNATFRILEVGCGAGNSVFPILNTLQN
IPGSFLYCCDFASEAVELVKSHESYSEAQCSAFIHDVCDDGLAYPFPDGILDVVLLVFVLSSIHPDRMQA
VAHRLSRLLKPGGMLLFRDHGRYDNAQLRFKKGRCLSENFYVRGDGTRAYFFTKGEIRRMFCEAGLHEKQ
NLVDHRLQVNRKKQVQMHRVWIQGKFQKPSPWTPQSGN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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