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Report for CCDS22382.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22382.1 Public Mus musculus 8 Il12rb1 23 108 98 CCDS HistoryNCBI Gene:16161Re-query CCDS DB by CCDS ID:22382.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22382.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000000808.7 ENSMUSP00000000808.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000000808.7Link to Ensembl Protein Viewer:ENSMUSP00000000808.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000000808Re-query CCDS DB by Protein ID:ENSMUSP00000000808
Original member NCBI NM_008353.2 NP_032379.2 Updated not alive Link to Nucleotide Sequence:NM_008353.2Link to Protein Sequence:NP_032379.2Re-query CCDS DB by Nucleotide ID:NM_008353Re-query CCDS DB by Protein ID:NP_032379
Current member NCBI NM_008353.3 NP_032379.2 Accepted alive Link to Nucleotide Sequence:NM_008353.3Link to Protein Sequence:NP_032379.2Re-query CCDS DB by Nucleotide ID:NM_008353Re-query CCDS DB by Protein ID:NP_032379Link to BLAST:NP_032379.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032379.2 738 Q60837 738 100% 0 0

Chromosomal Locations for CCDS 22382.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 70808552 70808618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70809831 70809890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70810555 70810669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70811039 70811232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70812478 70812614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70813305 70813371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70813653 70813778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70814066 70814148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70814437 70814674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70815702 70815869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70816433 70816567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70816884 70817039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70817212 70817346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70819325 70819421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70819682 70819763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70820515 70820871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2217 nt):
ATGGACATGATGGGGCTGGCAGGGACCAGCAAACACATCACCTTCCTCCTGCTTTGCCAGCTAGGCGCCT
CAGGCCCAGGTGATGGCTGCTGCGTTGAGAAGACATCGTTCCCAGAGGGAGCCTCAGGCTCACCCTTAGG
ACCCAGGAACTTGAGTTGCTACAGGGTTTCCAAGACAGACTATGAGTGCTCCTGGCAGTATGATGGCCCT
GAGGACAATGTTTCTCACGTCCTGTGGTGCTGCTTTGTCCCTCCGAACCATACCCACACCGGCCAGGAGC
GCTGCCGCTACTTCTCCTCAGGCCCAGACCGCACTGTGCAGTTCTGGGAACAGGACGGTATCCCTGTGCT
GTCCAAGGTCAACTTCTGGGTGGAGTCTCGGCTTGGGAACCGAACCATGAAGTCCCAGAAGATATCCCAG
TACCTGTACAACTGGACCAAGACGACCCCTCCCCTGGGACACATCAAGGTGTCACAATCACACCGGCAGT
TGCGAATGGACTGGAATGTGTCTGAAGAGGCCGGTGCTGAGGTACAGTTCAGGCGCCGTATGCCCACAAC
GAATTGGACCTTGGGTGACTGCGGACCTCAGGTTAACTCTGGCTCAGGTGTGCTTGGTGACATTCGTGGG
AGCATGTCTGAGTCCTGCCTCTGCCCTTCTGAGAACATGGCCCAAGAGATCCAGATACGGAGGAGGAGGC
GGCTCTCCTCAGGAGCCCCTGGAGGTCCCTGGAGTGATTGGAGCATGCCTGTGTGTGTTCCACCTGAAGT
CCTTCCCCAGGCCAAGATTAAGTTCTTGGTGGAGCCCCTGAACCAAGGTGGAAGGAGGCGTCTAACCATG
CAAGGACAGTCACCACAGCTGGCAGTCCCGGAAGGCTGCCGAGGCAGGCCTGGTGCGCAGGTGAAGAAGC
ACTTGGTGCTGGTGCGCATGCTGTCCTGCAGGTGCCAGGCTCAGACCTCGAAGACCGTGCCCCTGGGCAA
GAAGCTGAACCTCTCCGGGGCCACCTATGACCTGAATGTGCTCGCCAAAACTCGTTTCGGTCGCAGCACC
ATCCAGAAGTGGCACCTTCCTGCCCAAGAGCTCACAGAGACAAGAGCCCTGAATGTCAGCGTGGGAGGCA
ACATGACATCCATGCAGTGGGCAGCCCAGGCTCCCGGCACCACCTACTGCCTTGAGTGGCAGCCATGGTT
CCAGCACAGGAACCACACACACTGTACCCTGATTGTACCAGAAGAAGAGGATCCTGCCAAGATGGTGACA
CACAGCTGGAGCTCTAAACCTACCCTGGAGCAGGAGGAATGTTACCGCATCACAGTGTTCGCCTCCAAGA
ACCCCAAGAATCCCATGCTGTGGGCCACAGTCCTGTCCAGTTACTACTTTGGGGGTAACGCCTCGAGAGC
CGGTACTCCACGACACGTGTCGGTGAGGAACCAAACCGGGGACTCGGTGTCCGTGGAGTGGACGGCGTCA
CAGCTGAGCACCTGCCCGGGGGTCCTGACGCAATACGTCGTGCGCTGCGAGGCTGAAGACGGCGCGTGGG
AGTCAGAGTGGCTCGTGCCACCCACTAAAACCCAAGTGACACTTGACGGACTGCGCAGCCGAGTAATGTA
CAAGGTTCAGGTGCGAGCCGACACTGCGAGGCTCCCGGGTGCCTGGAGTCATCCCCAGCGCTTTAGCTTT
GAGGTGCAGATTTCCCGTTTATCCATCATTTTCGCGTCTCTGGGAAGCTTCGCCAGCGTCCTCCTCGTGG
GCAGTCTCGGATACATTGGCTTAAACAGGGCCGCCTGGCACTTGTGCCCACCCCTGCCTACACCCTGTGG
CAGCACTGCCGTGGAGTTCCCTGGCAGCCAGGGCAAGCAGGCTTGGCAGTGGTGCAACCCTGAGGACTTC
CCGGAGGTGTTGTACCCGCGAGATGCGCTGGTGGTCGAGATGCCCGGAGACAGAGGCGACGGGACAGAGT
CGCCCCAGGCCGCCCCTGAGTGCGCCCTGGACACAAGGCGGCCCTTGGAGACTCAGAGGCAGAGGCAGGT
GCAGGCACTGTCAGAGGCCAGGCGCCTGGGCCTGGCTAGGGAGGACTGTCCCCGTGGTGACCTGGCCCAC
GTGACACTCCCGCTGCTCCTGGGAGGTGTGACCCAGGGAGCCTCTGTACTTGACGATCTTTGGAGGACCC
ATAAGACTGCGGAGCCGGGACCGCCCACTTTGGGGCAAGAGGCCTGA

Translation (738 aa):
MDMMGLAGTSKHITFLLLCQLGASGPGDGCCVEKTSFPEGASGSPLGPRNLSCYRVSKTDYECSWQYDGP
EDNVSHVLWCCFVPPNHTHTGQERCRYFSSGPDRTVQFWEQDGIPVLSKVNFWVESRLGNRTMKSQKISQ
YLYNWTKTTPPLGHIKVSQSHRQLRMDWNVSEEAGAEVQFRRRMPTTNWTLGDCGPQVNSGSGVLGDIRG
SMSESCLCPSENMAQEIQIRRRRRLSSGAPGGPWSDWSMPVCVPPEVLPQAKIKFLVEPLNQGGRRRLTM
QGQSPQLAVPEGCRGRPGAQVKKHLVLVRMLSCRCQAQTSKTVPLGKKLNLSGATYDLNVLAKTRFGRST
IQKWHLPAQELTETRALNVSVGGNMTSMQWAAQAPGTTYCLEWQPWFQHRNHTHCTLIVPEEEDPAKMVT
HSWSSKPTLEQEECYRITVFASKNPKNPMLWATVLSSYYFGGNASRAGTPRHVSVRNQTGDSVSVEWTAS
QLSTCPGVLTQYVVRCEAEDGAWESEWLVPPTKTQVTLDGLRSRVMYKVQVRADTARLPGAWSHPQRFSF
EVQISRLSIIFASLGSFASVLLVGSLGYIGLNRAAWHLCPPLPTPCGSTAVEFPGSQGKQAWQWCNPEDF
PEVLYPRDALVVEMPGDRGDGTESPQAAPECALDTRRPLETQRQRQVQALSEARRLGLAREDCPRGDLAH
VTLPLLLGGVTQGASVLDDLWRTHKTAEPGPPTLGQEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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