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Report for CCDS11099.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11099.1 Public Homo sapiens 17 EIF5A 24 110 108 CCDS HistoryNCBI Gene:1984Re-query CCDS DB by CCDS ID:11099.1Re-query CCDS DB by GeneID:1984See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11099.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336458.13 ENSP00000336776.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000336458.13Link to Ensembl Protein Viewer:ENSP00000336776.8Re-query CCDS DB by Nucleotide ID:ENST00000336458Re-query CCDS DB by Protein ID:ENSP00000336776
Original member Current member EBI ENST00000419711.6 ENSP00000390677.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000419711.6Link to Ensembl Protein Viewer:ENSP00000390677.2Re-query CCDS DB by Nucleotide ID:ENST00000419711Re-query CCDS DB by Protein ID:ENSP00000390677
Original member Current member EBI ENST00000416016.2 ENSP00000396073.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000416016.2Link to Ensembl Protein Viewer:ENSP00000396073.2Re-query CCDS DB by Nucleotide ID:ENST00000416016Re-query CCDS DB by Protein ID:ENSP00000396073
Original member Current member EBI ENST00000571955.5 ENSP00000458269.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000571955.5Link to Ensembl Protein Viewer:ENSP00000458269.1Re-query CCDS DB by Nucleotide ID:ENST00000571955Re-query CCDS DB by Protein ID:ENSP00000458269
Original member Current member EBI ENST00000576930.5 ENSP00000459196.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000576930.5Link to Ensembl Protein Viewer:ENSP00000459196.1Re-query CCDS DB by Nucleotide ID:ENST00000576930Re-query CCDS DB by Protein ID:ENSP00000459196
Original member Current member EBI ENST00000573542.5 ENSP00000459611.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000573542.5Link to Ensembl Protein Viewer:ENSP00000459611.1Re-query CCDS DB by Nucleotide ID:ENST00000573542Re-query CCDS DB by Protein ID:ENSP00000459611
Original member Current member NCBI NM_001143761.1 NP_001137233.1 Accepted alive Link to Nucleotide Sequence:NM_001143761.1Link to Protein Sequence:NP_001137233.1Re-query CCDS DB by Nucleotide ID:NM_001143761Re-query CCDS DB by Protein ID:NP_001137233Link to BLAST:NP_001137233.1
Original member Current member NCBI NM_001143762.2 NP_001137234.1 Accepted alive Link to Nucleotide Sequence:NM_001143762.2Link to Protein Sequence:NP_001137234.1Re-query CCDS DB by Nucleotide ID:NM_001143762Re-query CCDS DB by Protein ID:NP_001137234Link to BLAST:NP_001137234.1
Original member Current member NCBI NM_001370420.1 NP_001357349.1 Accepted alive Link to Nucleotide Sequence:NM_001370420.1Link to Protein Sequence:NP_001357349.1Re-query CCDS DB by Nucleotide ID:NM_001370420Re-query CCDS DB by Protein ID:NP_001357349Link to BLAST:NP_001357349.1
Original member Current member NCBI NM_001370421.1 NP_001357350.1 Accepted alive Link to Nucleotide Sequence:NM_001370421.1Link to Protein Sequence:NP_001357350.1Re-query CCDS DB by Nucleotide ID:NM_001370421Re-query CCDS DB by Protein ID:NP_001357350Link to BLAST:NP_001357350.1
Original member Current member NCBI NM_001970.5 NP_001961.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001970.5Link to Protein Sequence:NP_001961.1Re-query CCDS DB by Nucleotide ID:NM_001970Re-query CCDS DB by Protein ID:NP_001961Link to BLAST:NP_001961.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137233.1 154 P63241-1 154 100% 0 0
NP_001137234.1 154 P63241-1 154 100% 0 0
NP_001357349.1 154 P63241-1 154 100% 0 0
NP_001357350.1 154 P63241-1 154 100% 0 0
NP_001961.1 154 P63241-1 154 100% 0 0

Chromosomal Locations for CCDS 11099.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 7309636 7309800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7311018 7311122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7311350 7311481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7311578 7311640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (465 nt):
ATGGCAGATGACTTGGACTTCGAGACAGGAGATGCAGGGGCCTCAGCCACCTTCCCAATGCAGTGCTCAG
CATTACGTAAGAATGGCTTTGTGGTGCTCAAAGGCCGGCCATGTAAGATCGTCGAGATGTCTACTTCGAA
GACTGGCAAGCACGGCCACGCCAAGGTCCATCTGGTTGGTATTGACATCTTTACTGGGAAGAAATATGAA
GATATCTGCCCGTCAACTCATAATATGGATGTCCCCAACATCAAAAGGAATGACTTCCAGCTGATTGGCA
TCCAGGATGGGTACCTATCACTGCTCCAGGACAGCGGGGAGGTACGAGAGGACCTTCGTCTCCCTGAGGG
AGACCTTGGCAAGGAGATTGAGCAGAAGTACGACTGTGGAGAAGAGATCCTGATCACGGTGCTGTCTGCC
ATGACAGAGGAGGCAGCTGTTGCAATCAAGGCCATGGCAAAATAA

Translation (154 aa):
MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYE
DICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLGKEIEQKYDCGEEILITVLSA
MTEEAAVAIKAMAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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