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Report for CCDS46127.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46127.1 Public Homo sapiens 19 ARHGAP35 24 110 108 CCDS HistoryNCBI Gene:2909Re-query CCDS DB by CCDS ID:46127.1Re-query CCDS DB by GeneID:2909See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46127.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000672722.1 ENSP00000500409.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000672722.1Link to Ensembl Protein Viewer:ENSP00000500409.1Re-query CCDS DB by Nucleotide ID:ENST00000672722Re-query CCDS DB by Protein ID:ENSP00000500409
Original member Current member NCBI NM_004491.5 NP_004482.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004491.5Link to Protein Sequence:NP_004482.4Re-query CCDS DB by Nucleotide ID:NM_004491Re-query CCDS DB by Protein ID:NP_004482Link to BLAST:NP_004482.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004482.4 1499 Q9NRY4 1499 100% 0 0

Chromosomal Locations for CCDS 46127.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 46918676 46922356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46937264 46937408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46987989 46988066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46989544 46989675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46999304 46999409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 47000331 47000688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4500 nt):
ATGATGATGGCAAGAAAGCAAGATGTCCGAATTCCCACCTACAACATCAGTGTGGTGGGATTATCTGGGA
CCGAGAAGGAAAAGGGCCAGTGTGGGATTGGAAAGTCTTGTTTGTGCAACCGCTTCGTGCGCCCGAGTGC
TGACGAGTTTCACTTGGACCATACCTCCGTCCTCAGCACCAGTGACTTTGGAGGGCGAGTGGTCAATAAT
GACCACTTTCTCTACTGGGGAGAAGTTAGCCGCTCCCTGGAGGATTGTGTGGAATGTAAGATGCACATTG
TGGAGCAGACTGAATTTATTGATGATCAGACTTTTCAACCTCATCGAAGCACGGCCCTGCAGCCCTATAT
CAAGAGAGCTGCTGCGACCAAGCTTGCATCAGCTGAAAAACTCATGTACTTTTGCACTGACCAGCTGGGG
CTGGAGCAGGACTTTGAGCAGAAACAAATGCCAGACGGAAAGCTGCTGGTTGATGGTTTTCTTCTTGGTA
TTGATGTTAGCAGGGGCATGAATAGGAACTTTGATGACCAGCTCAAGTTTGTCTCCAATCTCTACAATCA
GCTTGCAAAAACAAAAAAGCCCATAGTGGTGGTCCTGACTAAGTGTGACGAAGGTGTTGAGCGGTACATT
AGAGATGCACATACTTTTGCCTTAAGCAAAAAGAACCTCCAGGTTGTGGAGACCTCAGCGAGATCCAATG
TAAACGTGGACTTGGCTTTCAGCACCTTAGTGCAACTCATTGATAAAAGTCGGGGAAAGACAAAAATCAT
TCCTTATTTTGAAGCTCTCAAGCAGCAGAGTCAGCAGATAGCTACAGCAAAAGACAAGTATGAGTGGCTG
GTGAGTCGCATTGTGAAAAACCACAATGAGAACTGGCTGAGTGTCAGCCGAAAGATGCAGGCCTCTCCAG
AATACCAGGACTATGTCTACCTGGAAGGGACTCAGAAAGCCAAGAAGCTGTTTCTACAGCACATCCACCG
CCTCAAGCATGAGCATATCGAGCGTAGGAGAAAGCTGTACCTGGCAGCCCTGCCATTAGCTTTTGAAGCT
CTTATACCTAATCTAGATGAAATAGACCACCTAAGCTGCATAAAAGCCAAAAAGCTCTTAGAAACCAAGC
CAGAATTCTTGAAGTGGTTTGTTGTGCTTGAAGAGACCCCATGGGATGCCACCAGTCACATTGACAACAT
GGAAAACGAACGGATTCCCTTTGATTTAATGGATACCGTCCCTGCAGAGCAGCTATACGAGGCCCACTTA
GAGAAGCTGAGGAACGAAAGGAAAAGAGTTGAGATGCGAAGGGCGTTTAAAGAAAACCTGGAGACTTCTC
CTTTCATAACTCCCGGAAAGCCTTGGGAAGAGGCCCGTAGTTTTATTATGAATGAGGATTTCTACCAGTG
GCTGGAGGAATCTGTATACATGGATATTTATGGCAAACACCAAAAGCAAATTATAGATAAAGCAAAGGAA
GAATTTCAGGAGTTGCTTTTGGAATATTCAGAATTGTTTTATGAACTGGAGCTGGATGCTAAGCCCAGCA
AGGAGAAGATGGGTGTTATTCAGGATGTTCTGGGAGAGGAACAGCGATTTAAAGCATTACAAAAGCTCCA
AGCAGAGCGTGATGCCCTTATTCTGAAACACATTCATTTTGTGTACCACCCAACAAAGGAGACATGCCCC
AGCTGCCCAGCTTGTGTGGACGCTAAGATTGAGCACTTGATTAGTTCTCGGTTTATCCGGCCGTCTGACC
GGAATCAGAAAAATTCACTCTCTGACCCTAACATTGATAGAATCAACTTGGTTATATTGGGCAAAGACGG
CCTTGCCCGAGAGTTGGCCAATGAGATTCGAGCTCTTTGTACAAATGATGACAAGTATGTGATAGATGGT
AAAATGTATGAGCTTTCCCTGAGGCCAATAGAGGGGAATGTCAGGCTTCCTGTGAACTCTTTCCAGACGC
CAACATTTCAGCCCCACGGCTGTCTCTGCCTTTACAATTCAAAGGAATCGCTATCCTATGTAGTGGAAAG
TATAGAGAAGAGTAGAGAGTCCACGCTGGGCCGGCGGGATAATCATTTAGTCCATCTCCCCCTTACATTA
ATTTTGGTTAACAAGAGAGGAGACACCAGTGGAGAGACTCTGCATAGCTTAATACAGCAAGGTCAACAAA
TTGCTAGCAAACTTCAGTGTGTCTTTCTCGACCCTGCTTCTGCTGGCATTGGTTACGGACGCAACATTAA
TGAAAAGCAAATCAGTCAAGTTTTGAAGGGACTCCTGGACTCTAAGCGTAACTTAAACCTGGTCAGTTCT
ACTGCTAGCATCAAAGATTTGGCTGATGTTGATCTGCGAATTGTTATGTGTCTGATGTGTGGAGATCCTT
TTAGTGCAGATGACATACTTTTTCCTGTCCTTCAGTCCCAAACCTGTAAATCTTCCCATTGTGGAAGCAA
CAACTCTGTTTTACTTGAACTACCAATCGGACTGCACAAGAAGCGGATTGAACTGTCTGTTCTTTCATAC
CATTCCTCCTTTAGCATCAGAAAGAGCCGGTTGGTTCATGGGTACATTGTTTTTTATTCAGCCAAACGTA
AGGCCTCTTTGGCTATGTTACGTGCCTTTCTTTGTGAAGTGCAGGATATTATCCCTATTCAGCTTGTAGC
ACTCACTGATGGCGCTGTAGATGTCCTGGACAATGACTTAAGTAGGGAACAGCTAACTGAGGGGGAGGAG
ATTGCTCAAGAAATTGACGGAAGGTTCACAAGCATCCCCTGTAGCCAACCCCAGCATAAACTTGAGATCT
TTCACCCATTTTTTAAAGATGTGGTGGAAAAAAAGAACATAATCGAGGCTACTCATATGTACGATAATGC
TGCCGAGGCCTGTAGCACCACCGAAGAGGTGTTTAACTCCCCCCGGGCAGGATCACCGCTCTGCAACTCA
AACCTGCAGGATTCAGAAGAAGATATCGAGCCATCTTACAGCCTGTTTCGAGAAGACACATCACTGCCTT
CTCTGTCCAAAGACCATTCTAAGCTCTCTATGGAACTGGAGGGAAATGATGGGCTGTCTTTCATTATGAG
CAATTTTGAGAGTAAACTGAACAACAAAGTACCTCCGCCAGTCAAACCAAAGCCTCCTGTCCATTTTGAA
ATTACAAAGGGGGATCTATCTTATTTAGACCAAGGCCATAGGGATGGACAGAGGAAGTCTGTGTCTTCTA
GCCCCTGGCTGCCTCAGGATGGGTTTGATCCTTCTGACTATGCTGAACCCATGGATGCTGTGGTGAAGCC
AAGGAATGAAGAAGAAAACATATACTCCGTGCCCCATGACAGCACCCAAGGCAAAATCATCACCATTCGG
AATATCAACAAAGCCCAGTCCAACGGCAGCGGGAATGGTTCTGACAGTGAAATGGACACCAGCTCTCTAG
AGCGAGGGCGCAAGGTTTCCATCGTGAGCAAGCCAGTGCTGTACAGGACGAGATGCACCCGGCTGGGGCG
GTTTGCTAGTTACCGGACCAGCTTCAGCGTGGGGAGTGATGATGAGCTGGGGCCCATCCGGAAGAAAGAG
GAGGATCAGGCATCCCAGGGTTATAAAGGGGACAATGCTGTCATTCCATACGAAACAGACGAAGACCCGC
GGAGGAGGAATATTCTTCGCAGCCTAAGGAGGAACACTAAGAAACCAAAGCCCAAACCCCGGCCATCCAT
CACAAAGGCAACCTGGGAGAGTAACTATTTTGGGGTGCCCTTAACAACTGTCGTGACTCCAGAGAAGCCG
ATCCCCATTTTTATTGAAAGATGTATTGAGTACATTGAAGCCACAGGACTGAGCACGGAAGGCATCTACC
GGGTCAGCGGGAACAAGTCTGAGATGGAGAGTCTGCAGAGACAGTTTGATCAAGACCACAACCTGGACCT
GGCAGAGAAAGACTTTACGGTGAATACCGTGGCTGGTGCCATGAAGAGCTTTTTCTCAGAACTGCCTGAC
CCCCTGGTCCCGTATAACATGCAGATCGACTTGGTGGAAGCACACAAAATCAACGACCGGGAGCAGAAGT
TGCATGCCCTTAAGGAGGTATTAAAGAAATTTCCAAAGGAAAACCACGAAGTCTTCAAGTATGTCATCTC
TCACCTAAACAAGGTCAGCCACAACAACAAGGTGAATCTCATGACCAGCGAGAACCTCTCCATCTGCTTC
TGGCCCACCTTGATGAGACCTGATTTCAGCACTATGGACGCCCTCACAGCCACGCGCACCTACCAGACAA
TCATTGAACTCTTTATCCAGCAGTGCCCCTTCTTCTTCTACAATCGGCCCATCACCGAGCCCCCCGGCGC
CAGGCCCAGCTCCCCCTCTGCCGTGGCTTCCACCGTCCCCTTCCTCACTTCCACGCCTGTCACAAGTCAG
CCGTCGCCCCCACAGTCGCCTCCACCCACCCCCCAGTCCCCAATGCAGCCACTGCTTCCCTCCCAGCTTC
AAGCCGAACACACGCTGTGA

Translation (1499 aa):
MMMARKQDVRIPTYNISVVGLSGTEKEKGQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTSDFGGRVVNN
DHFLYWGEVSRSLEDCVECKMHIVEQTEFIDDQTFQPHRSTALQPYIKRAAATKLASAEKLMYFCTDQLG
LEQDFEQKQMPDGKLLVDGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKKPIVVVLTKCDEGVERYI
RDAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLIDKSRGKTKIIPYFEALKQQSQQIATAKDKYEWL
VSRIVKNHNENWLSVSRKMQASPEYQDYVYLEGTQKAKKLFLQHIHRLKHEHIERRRKLYLAALPLAFEA
LIPNLDEIDHLSCIKAKKLLETKPEFLKWFVVLEETPWDATSHIDNMENERIPFDLMDTVPAEQLYEAHL
EKLRNERKRVEMRRAFKENLETSPFITPGKPWEEARSFIMNEDFYQWLEESVYMDIYGKHQKQIIDKAKE
EFQELLLEYSELFYELELDAKPSKEKMGVIQDVLGEEQRFKALQKLQAERDALILKHIHFVYHPTKETCP
SCPACVDAKIEHLISSRFIRPSDRNQKNSLSDPNIDRINLVILGKDGLARELANEIRALCTNDDKYVIDG
KMYELSLRPIEGNVRLPVNSFQTPTFQPHGCLCLYNSKESLSYVVESIEKSRESTLGRRDNHLVHLPLTL
ILVNKRGDTSGETLHSLIQQGQQIASKLQCVFLDPASAGIGYGRNINEKQISQVLKGLLDSKRNLNLVSS
TASIKDLADVDLRIVMCLMCGDPFSADDILFPVLQSQTCKSSHCGSNNSVLLELPIGLHKKRIELSVLSY
HSSFSIRKSRLVHGYIVFYSAKRKASLAMLRAFLCEVQDIIPIQLVALTDGAVDVLDNDLSREQLTEGEE
IAQEIDGRFTSIPCSQPQHKLEIFHPFFKDVVEKKNIIEATHMYDNAAEACSTTEEVFNSPRAGSPLCNS
NLQDSEEDIEPSYSLFREDTSLPSLSKDHSKLSMELEGNDGLSFIMSNFESKLNNKVPPPVKPKPPVHFE
ITKGDLSYLDQGHRDGQRKSVSSSPWLPQDGFDPSDYAEPMDAVVKPRNEEENIYSVPHDSTQGKIITIR
NINKAQSNGSGNGSDSEMDTSSLERGRKVSIVSKPVLYRTRCTRLGRFASYRTSFSVGSDDELGPIRKKE
EDQASQGYKGDNAVIPYETDEDPRRRNILRSLRRNTKKPKPKPRPSITKATWESNYFGVPLTTVVTPEKP
IPIFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDLAEKDFTVNTVAGAMKSFFSELPD
PLVPYNMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLNKVSHNNKVNLMTSENLSICF
WPTLMRPDFSTMDALTATRTYQTIIELFIQQCPFFFYNRPITEPPGARPSSPSAVASTVPFLTSTPVTSQ
PSPPQSPPPTPQSPMQPLLPSQLQAEHTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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