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Report for CCDS31639.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31639.1 Public Homo sapiens 11 OR2AT4 24 110 108 CCDS HistoryNCBI Gene:341152Re-query CCDS DB by CCDS ID:31639.1Re-query CCDS DB by GeneID:341152See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31639.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000305159.3 ENSP00000304846.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000305159.3Link to Ensembl Protein Viewer:ENSP00000304846.3Re-query CCDS DB by Nucleotide ID:ENST00000305159Re-query CCDS DB by Protein ID:ENSP00000304846
Original member Current member EBI ENST00000641541.1 ENSP00000493299.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641541.1Link to Ensembl Protein Viewer:ENSP00000493299.1Re-query CCDS DB by Nucleotide ID:ENST00000641541Re-query CCDS DB by Protein ID:ENSP00000493299
Original member Current member EBI ENST00000641504.1 ENSP00000493318.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641504.1Link to Ensembl Protein Viewer:ENSP00000493318.1Re-query CCDS DB by Nucleotide ID:ENST00000641504Re-query CCDS DB by Protein ID:ENSP00000493318
Original member Current member EBI ENST00000641593.1 ENSP00000493416.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641593.1Link to Ensembl Protein Viewer:ENSP00000493416.1Re-query CCDS DB by Nucleotide ID:ENST00000641593Re-query CCDS DB by Protein ID:ENSP00000493416
Original member Current member EBI ENST00000641931.1 ENSP00000493460.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641931.1Link to Ensembl Protein Viewer:ENSP00000493460.1Re-query CCDS DB by Nucleotide ID:ENST00000641931Re-query CCDS DB by Protein ID:ENSP00000493460
Original member Current member NCBI NM_001005285.2 NP_001005285.1 Accepted alive Link to Nucleotide Sequence:NM_001005285.2Link to Protein Sequence:NP_001005285.1Re-query CCDS DB by Nucleotide ID:NM_001005285Re-query CCDS DB by Protein ID:NP_001005285Link to BLAST:NP_001005285.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005285.1 320 A6NND4 320 100% 0 0

Chromosomal Locations for CCDS 31639.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 75088751 75089713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (963 nt):
ATGGATGCCACAGCCTGTAATGAATCAGTGGATGGCTCACCCGTCTTCTATCTATTGGGCATCCCCTCTC
TGCCAGAGACCTTCTTCCTCCCTGTGTTTTTTATTTTCCTCCTCTTCTACCTTCTCATCCTGATGGGTAA
TGCCCTGATCCTGGTGGCCGTGGTGGCAGAGCCCAGCCTCCACAAGCCCATGTACTTCTTTCTGATCAAT
CTCTCCACCTTGGACATCCTTTTCACCACAACCACTGTCCCCAAGATGCTGTCCTTATTCTTGCTTGGGG
ACCGCTTCCTCAGCTTTTCTTCCTGCTTACTGCAGATGTACCTCTTCCAAAGTTTTACATGTTCAGAAGC
CTTCATCCTGGTGGTCATGGCCTATGACCGCTATGTGGCTATCTGCCACCCACTGCACTACCCTGTCCTC
ATGAACCCACAGACCAATGCTACCTTGGCAGCCAGTGCCTGGCTAACTGCCCTCCTCCTGCCCATCCCAG
CAGTAGTAAGGACCTCCCAGATGGCATATAACAGCATTGCCTACATCTACCACTGCTTCTGTGATCATCT
GGCTGTGGTCCAGGCCTCCTGCTCTGACACCACCCCCCAGACCCTCATGGGCTTCTGCATCGCCATGGTG
GTGTCCTTCCTCCCCCTTCTCCTGGTGCTTCTCTCCTATGTCCACATCCTGGCCTCAGTGCTTCGCATCA
GTTCCCTAGAAGGACGGGCAAAAGCCTTCTCCACCTGCAGCTCCCACCTTCTGGTCGTGGGCACCTACTA
CTCATCTATTGCCATAGCCTACGTGGCCTACAGGGCTGACCTGCCCCTTGACTTCCATATCATGGGCAAT
GTGGTATATGCCATTCTCACACCAATTCTCAACCCCCTCATTTACACGCTGAGAAACAGGGATGTAAAGG
CAGCCATCACCAAAATCATGTCTCAAGACCCAGGCTGTGACAGGAGCATTTGA

Translation (320 aa):
MDATACNESVDGSPVFYLLGIPSLPETFFLPVFFIFLLFYLLILMGNALILVAVVAEPSLHKPMYFFLIN
LSTLDILFTTTTVPKMLSLFLLGDRFLSFSSCLLQMYLFQSFTCSEAFILVVMAYDRYVAICHPLHYPVL
MNPQTNATLAASAWLTALLLPIPAVVRTSQMAYNSIAYIYHCFCDHLAVVQASCSDTTPQTLMGFCIAMV
VSFLPLLLVLLSYVHILASVLRISSLEGRAKAFSTCSSHLLVVGTYYSSIAIAYVAYRADLPLDFHIMGN
VVYAILTPILNPLIYTLRNRDVKAAITKIMSQDPGCDRSI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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