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Report for CCDS33322.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33322.1 Public Homo sapiens 2 SP5 24 110 108 CCDS HistoryNCBI Gene:389058Re-query CCDS DB by CCDS ID:33322.1Re-query CCDS DB by GeneID:389058See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33322.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375281.4 ENSP00000364430.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375281.4Link to Ensembl Protein Viewer:ENSP00000364430.3Re-query CCDS DB by Nucleotide ID:ENST00000375281Re-query CCDS DB by Protein ID:ENSP00000364430
Original member Current member NCBI NM_001003845.3 NP_001003845.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001003845.3Link to Protein Sequence:NP_001003845.1Re-query CCDS DB by Nucleotide ID:NM_001003845Re-query CCDS DB by Protein ID:NP_001003845Link to BLAST:NP_001003845.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001003845.1 398 Q6BEB4 398 100% 0 0

Chromosomal Locations for CCDS 33322.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 170715513 170715563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 170716259 170717404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1197 nt):
ATGGCCGCGGTGGCCGTCCTCCGGAACGACTCGCTGCAGGCCTTTCTCCAGGACCGCACCCCCAGCGCCT
CCCCGGACCTGGGCAAGCACTCGCCCCTGGCATTGCTGGCCGCCACCTGTAGCCGCATCGGCCAGCCGGG
CGCGGCGGCGCCCCCGGACTTCCTGCAGGTGCCCTACGACCCCGCGCTGGGCTCACCCTCCAGGCTCTTC
CACCCGTGGACCGCCGACATGCCGGCGCACTCGCCAGGCGCACTGCCGCCCCCGCATCCCAGCTTGGGGC
TGACGCCGCAGAAGACGCACCTGCAGCCGTCCTTCGGGGCTGCGCACGAGCTTCCCCTTACACCCCCCGC
CGACCCCTCGTACCCCTACGAGTTCTCGCCGGTCAAGATGCTGCCCTCGAGCATGGCGGCTCTGCCCGCC
AGCTGCGCGCCCGCCTACGTGCCCTACGCGGCGCAGGCCGCGCTGCCGCCAGGCTACTCCAACCTGCTGC
CTCCGCCGCCGCCACCGCCCCCGCCGCCCACCTGCCGCCAGTTGTCACCCAACCCGGCCCCCGACGACCT
CCCGTGGTGGAGCATCCCGCAGGCGGGCGCCGGGCCGGGGGCCTCCGGGGTTCCGGGAAGCGGCCTCTCC
GGCGCCTGTGCCGGGGCCCCCCACGCGCCCCGCTTCCCCGCCTCTGCGGCCGCTGCTGCTGCGGCCGCCG
CCGCCCTACAAAGAGGCCTGGTGTTGGGCCCGTCGGACTTTGCGCAGTACCAGAGCCAGATCGCCGCGCT
GCTGCAGACCAAGGCCCCCCTGGCGGCCACGGCCAGGAGGTGCCGCCGCTGCCGCTGTCCCAACTGCCAG
GCGGCGGGCGGCGCCCCCGAGGCGGAGCCGGGGAAGAAGAAGCAGCACGTGTGCCACGTGCCGGGCTGCG
GCAAGGTGTACGGGAAGACGTCGCACCTGAAGGCGCACCTGCGCTGGCACACGGGCGAGCGACCCTTCGT
GTGCAACTGGCTCTTCTGCGGGAAGAGCTTCACGCGCTCGGACGAGCTGCAGCGGCACCTGCGGACTCAC
ACGGGCGAGAAGCGCTTTGCCTGTCCCGAGTGCGGCAAGCGCTTCATGCGCAGCGACCACCTCGCGAAGC
ACGTCAAGACTCACCAGAATAAGAAGCTCAAAGTCGCTGAGGCCGGGGTTAAGCGGGAGGACGCGCGGGA
CCTGTGA

Translation (398 aa):
MAAVAVLRNDSLQAFLQDRTPSASPDLGKHSPLALLAATCSRIGQPGAAAPPDFLQVPYDPALGSPSRLF
HPWTADMPAHSPGALPPPHPSLGLTPQKTHLQPSFGAAHELPLTPPADPSYPYEFSPVKMLPSSMAALPA
SCAPAYVPYAAQAALPPGYSNLLPPPPPPPPPPTCRQLSPNPAPDDLPWWSIPQAGAGPGASGVPGSGLS
GACAGAPHAPRFPASAAAAAAAAAALQRGLVLGPSDFAQYQSQIAALLQTKAPLAATARRCRRCRCPNCQ
AAGGAPEAEPGKKKQHVCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFTRSDELQRHLRTH
TGEKRFACPECGKRFMRSDHLAKHVKTHQNKKLKVAEAGVKREDARDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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