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Report for CCDS9202.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9202.1 Public Homo sapiens 12 POP5 24 110 108 CCDS HistoryNCBI Gene:51367Re-query CCDS DB by CCDS ID:9202.1Re-query CCDS DB by GeneID:51367See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9202.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357500.5 ENSP00000350098.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357500.5Link to Ensembl Protein Viewer:ENSP00000350098.4Re-query CCDS DB by Nucleotide ID:ENST00000357500Re-query CCDS DB by Protein ID:ENSP00000350098
Original member Current member NCBI NM_015918.4 NP_057002.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015918.4Link to Protein Sequence:NP_057002.2Re-query CCDS DB by Nucleotide ID:NM_015918Re-query CCDS DB by Protein ID:NP_057002Link to BLAST:NP_057002.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057002.2 163 Q969H6-1 163 100% 0 0

Chromosomal Locations for CCDS 9202.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 120579318 120579412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120579514 120579597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120579774 120579923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120581115 120581257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120581343 120581362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (492 nt):
ATGGTGCGGTTCAAGCACAGGTACCTGCTCTGCGAACTGGTGTCTGACGACCCCCGCTGCCGCCTAAGCC
TCGATGACCGAGTTCTGAGCAGCCTCGTACGGGACACGATCGCCAGGGTGCACGGAACTTTCGGCGCAGC
CGCCTGCTCCATCGGCTTCGCGGTTCGATATCTCAATGCCTATACTGGAATAGTGCTACTTCGATGCAGA
AAAGAATTCTATCAGCTTGTGTGGTCAGCTCTTCCCTTCATCACATACTTGGAGAACAAAGGACACCGTT
ACCCATGCTTTTTCAACACATTACATGTGGGAGGTACAATAAGAACATGTCAGAAGTTCCTAATTCAGTA
CAACAGGAGACAGCTGTTGATCTTGTTGCAGAACTGCACTGATGAAGGAGAGCGGGAAGCTATCCAGAAG
TCTGTGACAAGAAGCTGCTTATTAGAGGAGGAGGAGGAGTCAGGTGAGGAGGCTGCAGAAGCAATGGAGT
GA

Translation (163 aa):
MVRFKHRYLLCELVSDDPRCRLSLDDRVLSSLVRDTIARVHGTFGAAACSIGFAVRYLNAYTGIVLLRCR
KEFYQLVWSALPFITYLENKGHRYPCFFNTLHVGGTIRTCQKFLIQYNRRQLLILLQNCTDEGEREAIQK
SVTRSCLLEEEEESGEEAAEAME


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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