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Report for CCDS8681.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8681.1 Public Homo sapiens 12 CAPZA3 24 110 108 CCDS HistoryNCBI Gene:93661Re-query CCDS DB by CCDS ID:8681.1Re-query CCDS DB by GeneID:93661See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8681.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000317658.5 ENSP00000326238.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000317658.5Link to Ensembl Protein Viewer:ENSP00000326238.3Re-query CCDS DB by Nucleotide ID:ENST00000317658Re-query CCDS DB by Protein ID:ENSP00000326238
Original member Current member NCBI NM_033328.3 NP_201585.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033328.3Link to Protein Sequence:NP_201585.1Re-query CCDS DB by Nucleotide ID:NM_033328Re-query CCDS DB by Protein ID:NP_201585Link to BLAST:NP_201585.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_201585.1 299 Q96KX2 299 100% 0 0

Chromosomal Locations for CCDS 8681.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 18738269 18739168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (900 nt):
ATGACACTTAGCGTGCTGAGCAGGAAGGACAAGGAAAGAGTAATTCGCAGACTGTTATTACAGGCCCCTC
CAGGGGAATTTGTAAATGCCTTTGATGATCTCTGTCTGCTTATCCGTGATGAAAAACTTATGCACCACCA
AGGTGAGTGTGCAGGCCACCAACACTGCCAAAAATATTCTGTACCACTCTGCATCGATGGAAATCCAGTA
CTCTTGTCTCACCACAATGTAATGGGCGACTACCGATTTTTTGACCATCAAAGCAAACTTTCTTTCAAAT
ATGACCTGCTTCAAAATCAGCTGAAAGACATCCAAAGTCATGGTATCATTCAGAATGAGGCAGAATACCT
GAGAGTTGTTCTTCTGTGCGCCTTAAAACTGTATGTGAATGACCACTATCCAAAAGGAAATTGCAACATG
CTGAGAAAAACTGTCAAAAGTAAGGAGTACTTGATAGCTTGCATTGAAGATCACAACTATGAAACAGGAG
AGTGCTGGAACGGACTTTGGAAATCTAAATGGATTTTCCAAGTTAACCCATTTCTAACCCAAGTAACGGG
AAGAATATTTGTGCAAGCTCACTTCTTCAGGTGTGTCAACCTTCATATTGAAATATCCAAGGACCTGAAA
GAAAGCTTGGAAATAGTTAACCAAGCTCAACTGGCTCTAAGTTTTGCAAGGCTTGTGGAAGAGCAAGAGA
ACAAATTTCAAGCTGCAGTCTTGGAAGAATTACAGGAGTTATCCAATGAAGCCCTGAGAAAAATTCTACG
AAGGGATCTTCCAGTGACCCGCACTCTTATTGACTGGCACAGGATACTCTCTGACTTGAATCTGGTGATG
TATCCTAAATTAGGATATGTCATTTATTCAAGAAGTGTGTTGTGCAACTGGATAATATAA

Translation (299 aa):
MTLSVLSRKDKERVIRRLLLQAPPGEFVNAFDDLCLLIRDEKLMHHQGECAGHQHCQKYSVPLCIDGNPV
LLSHHNVMGDYRFFDHQSKLSFKYDLLQNQLKDIQSHGIIQNEAEYLRVVLLCALKLYVNDHYPKGNCNM
LRKTVKSKEYLIACIEDHNYETGECWNGLWKSKWIFQVNPFLTQVTGRIFVQAHFFRCVNLHIEISKDLK
ESLEIVNQAQLALSFARLVEEQENKFQAAVLEELQELSNEALRKILRRDLPVTRTLIDWHRILSDLNLVM
YPKLGYVIYSRSVLCNWII


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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