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Report for CCDS3632.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3632.1 Public Homo sapiens 4 NAP1L5 24 110 108 CCDS HistoryNCBI Gene:266812Re-query CCDS DB by CCDS ID:3632.1Re-query CCDS DB by GeneID:266812See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3632.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000323061.7 ENSP00000320488.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000323061.7Link to Ensembl Protein Viewer:ENSP00000320488.5Re-query CCDS DB by Nucleotide ID:ENST00000323061Re-query CCDS DB by Protein ID:ENSP00000320488
Original member Current member NCBI NM_153757.4 NP_715638.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153757.4Link to Protein Sequence:NP_715638.1Re-query CCDS DB by Nucleotide ID:NM_153757Re-query CCDS DB by Protein ID:NP_715638Link to BLAST:NP_715638.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_715638.1 182 Q96NT1 182 100% 0 0

Chromosomal Locations for CCDS 3632.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 88697206 88697754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (549 nt):
ATGGCCGACTCGGAAAACCAGGGGCCTGCGGAGCCTAGCCAGGCGGCGGCAGCGGCGGAGGCAGCGGCAG
AGGAGGTAATGGCGGAAGGCGGTGCGCAGGGTGGAGACTGTGACAGCGCGGCTGGTGACCCTGACAGCGC
GGCTGGTCAGATGGCTGAGGAGCCCCAGACCCCTGCAGAGAATGCCCCAAAGCCGAAAAATGACTTTATC
GAGAGCCTGCCTAATTCGGTGAAATGCCGAGTCCTGGCCCTCAAAAAGCTGCAGAAGCGATGCGATAAGA
TAGAAGCCAAATTTGATAAGGAATTTCAGGCTCTGGAAAAAAAGTATAATGACATCTATAAGCCCCTACT
CGCCAAGATCCAAGAGCTCACCGGCGAGATGGAGGGGTGTGCATGGACCTTGGAGGGGGAGGAGGAGGAG
GAAGAGGAGTACGAGGATGACGAGGAGGAGGGGGAAGACGAGGAGGAGGAGGAGGCTGCGGCAGAGGCTG
CCGCGGGGGCCAAACATGACGATGCCCACGCCGAGATGCCTGATGACGCCAAGAAGTAA

Translation (182 aa):
MADSENQGPAEPSQAAAAAEAAAEEVMAEGGAQGGDCDSAAGDPDSAAGQMAEEPQTPAENAPKPKNDFI
ESLPNSVKCRVLALKKLQKRCDKIEAKFDKEFQALEKKYNDIYKPLLAKIQELTGEMEGCAWTLEGEEEE
EEEYEDDEEEGEDEEEEEAAAEAAAGAKHDDAHAEMPDDAKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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