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Report for CCDS42961.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42961.1 Public Homo sapiens 21 KRTAP10-9 24 110 108 CCDS HistoryNCBI Gene:386676Re-query CCDS DB by CCDS ID:42961.1Re-query CCDS DB by GeneID:386676See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42961.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397911.5 ENSP00000381009.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397911.5Link to Ensembl Protein Viewer:ENSP00000381009.3Re-query CCDS DB by Nucleotide ID:ENST00000397911Re-query CCDS DB by Protein ID:ENSP00000381009
Original member Current member NCBI NM_198690.3 NP_941963.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198690.3Link to Protein Sequence:NP_941963.2Re-query CCDS DB by Nucleotide ID:NM_198690Re-query CCDS DB by Protein ID:NP_941963Link to BLAST:NP_941963.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_941963.2 292 P60411-1 292 100% 0 0

Chromosomal Locations for CCDS 42961.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 44627172 44628050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGGCCGCGTCCACCATGTCCATCCGCTCCAGCGCTTACTCCGACTCCTGGCAGGTGGACGACTGCCCAG
AGAGCTGCTGTGAGCCCCCCTGCTGCGCCACCAGCTGCTGCGCCCCGGCCCCCTGCCTGACCCTGGTCTG
CACCCCAGTGAGCCGTGTATCCAGCCCCTGCTGCCAGGTGACCTGTGAGCCCAGCCCCTGCCAATCAGGC
TGCACCAGCTCCTGCACGCCCTCGTGCTGCCAGCAGTCTAGCTGCCAGCCGGCTTACTGCACCTCCTCCC
CCTGCCAGCAGGCCTGCTGCGTGCCCGTCTGCTGCAAGCCTGTGTGCTGCGTGCCCGTCTGCTGTGGGGC
TTCTTCGTGCTGCCAACAGTCTAGCTACCAGCCAGCTTGCTGTGCCTCTTCCTCCTGCCAGCCGGCCTGC
TGTGTGCCCGTCTGCTGCAAACCTGTGTGCTGTGCGCCCACCTGCTCTGAGGATTCCTATTCATGCTGCC
AACAGTCTAGCTGCCAGCCAGCTTGCTGCACTTCCTCCCCCTGCCAGCAGTCCTACTGTGTGCCTGTCTG
CTGTAAGCCTGTCTGCTGCAAACCCATCTGCTGTGTGCCTGTCTGCTCTGGGGCTTCCTCTTTGTGCTGC
CAGCAGTCTGGCTGCCAGCCGGCTTGCTGCACCACCTCCTGCTGCAGACCCTCCTCCTCTGTGTCCCTCC
TCTGCCGCCCTGTGTGCAGGCCCGCCTGCTGCGTGCCCGTCTCCTCCTGCTGTGCCCCCACCTCCTCCCG
CCAGCCCAGCTATTGCCGCCAGGCCTCCTGTGTGTCCCTTCTCTGCCGCCCTGTGTGCTCCCGCCCGGCC
TGCTACAGCTTCTCCTCAGGCCAGAAGTCCAGCTGCTGA

Translation (292 aa):
MAASTMSIRSSAYSDSWQVDDCPESCCEPPCCATSCCAPAPCLTLVCTPVSRVSSPCCQVTCEPSPCQSG
CTSSCTPSCCQQSSCQPAYCTSSPCQQACCVPVCCKPVCCVPVCCGASSCCQQSSYQPACCASSSCQPAC
CVPVCCKPVCCAPTCSEDSYSCCQQSSCQPACCTSSPCQQSYCVPVCCKPVCCKPICCVPVCSGASSLCC
QQSGCQPACCTTSCCRPSSSVSLLCRPVCRPACCVPVSSCCAPTSSRQPSYCRQASCVSLLCRPVCSRPA
CYSFSSGQKSSC


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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