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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS49681.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
49681.1 |
Public |
Mus musculus |
15 |
Tcf20 |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 49681.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000109510.9 |
ENSMUSP00000105136.2 |
Accepted |
alive |
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NCBI |
NM_001114140.1 |
NP_001107612.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001107612.1 |
1987 |
Q9EPQ8-1 |
1987 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 49681.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (5964 nt): ATGCAGTCGTTTCGGGAGCAAAGCAGTTACCACGGAAACCAGCAGAGCTACCCACAGGAGGTGCACAGCT CATCCCGCATAGAAGAGTTCAGCCCTCGCCAGGCCCAGATGTTCCAGAATTTTGGGGGAGCAGGTGGTGG TAGTAGTGGCACTGGCAGCAGCAGTAGCGGTCGACGAGGAACAGCTGCTGCAGCGGCAGCAATGGCTAGT GAGACCTCTGGCCATCAAGGCTATCAGGGTTTCAGGAAAGAAGCTGGAGATTTTTACTACATGGCAGGCA ACAAAGACACAGTGGCAGCAGGAACCCCACAGCCTCCTCAGCGAAGGCCTTCTGGGCCTGTACAGAGCTA TGGACCTCCCCAGGGGAGCAGCTTTGGCAATCAGTATGCGAGTGAGGGTCATGTGAGCCAATTTCAAGCA CAGCACTCTGCCCTTGGTGGTGTGTCTCATTATCAGCAGGATTACACAGGGCCTTTCTCTCCTGGGAGTG CTCAGTATCAACAGCAGGCCTCTAGCCAACAACAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCA GCAACAGCAGCAGCAAGTACAGCAGTTGAGACAACAGCTTTACCAATCCCATCAGCCTCTGCCACAAACC ACTGGACAGCCAGCCTCTGGCTCATCGCATCTACAACCAATGCAGCGGCCCTCAACTCTGCCATCTTCTG CTGGTTATCAGTTAAGAGTAGGTCAGTTTGGACAGCACTACCAGTCTTCTGCTTCCTCCTCTTCCTCCTC CTCCTTCCCTTCTCCACAGCGTTTCAGTCAGTCTGGACAAAGCTATGATGGCAGTTACAGTGTGAATGCT GGATCTCAGTATGAAGGGCATAATGTGGGTTCTAATGCACAGGCTTATGGAACACAATCAAATTATAGCT ATCAACCTCAGTCTATGAAAAATTTTGAACAGGCAAAGATTCCACCAGGAAACCAGCAGGGGCAGCAGCA GCAACAGCAGCAACCACAACCTCAGCAACAGCAGCCGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAA CATCCTCCCCAGCATGTGATGCAGTACACAAATGCTGCCACCAAGATGCCTCTGCAAAGCCAGGTTGGGC AGTACAACCAGCCTGAGGTTCCTGTAAGGTCTCCCATGCAGTTCCACCAGAATTTCAGCCCTATTTCTAA CCCTTCTCCAGCTGCTTCTGTGGTTCAGTCTCCAAGCTGTAGCTCTACACCTTCTCCTCTCATGCAGAGT GGTGAGAATCTCCAGTGTGGGCAAGGCAATGTGCCCATGAGTTCCAGAAACCGAATTTTACAGCTAATGC CCCAGCTCAGTCCAACTCCATCAATGATGCCCAGTCCTAACTCTCATGCTGCAGGATTCAAAGGATTTGG ATTAGAAGGGGTGCCGGAAAAGCGGCTGACTGATCCTGGGTTGAGTAGTTTGAGTGCTTTGAGTAGTCAA GTGGCCAATCTTCCTAATACTGTCCAGCACATGTTACTTTCTGATGCTTTGACACCTCAGAAGAAGACGT CTAAGAGGCCCTCATCATCATCTAAGAAAGCAGATAGCTGTACAAACTCAGAAGGCTCCTCACAGCCTGA AGAACAACTAAAGTCCCCTATGGCTGAGTCATTGGATGGAGGTTGCTCTAGTAGTTCAGAAGATCAAGGT GAGAGGGTGAGGCAACTGAGTGGCCAGAGCACTAGCTCTGACACCACCTATAAGTGTGGCGCTTCAGAGA AAGCTGGCTCCTCACCAACACAAGGTGCTCAGAATGAGGCCCCTAGGCTCAGTACCAGTCCTGCAACTAG GGACGAAGCTGCCTCTCCAGGTGCTAAGGACACATCACTGTCATCTGAGGGGAACACAAAAGTCAATGAG AAGACAGTTGGGGTGATTGTCTCCCGAGAAGCCATGACAGGTCGGGTAGAAAAATCTGGTGGACAAGATA AAGGCTCCCAGGAGGATGATCCTGCTGCCAGTCAGAGACCACCTAGCAATAGTGGCGTAAAGGAAATCAG CCACACATCACTTCCACAGCCAGATCCTCCAGGAGGAGGGAGCAAAGGAAACAAGAATGGTGATAATAAT AGCTCTAACCACAATGGAGAGGGGAATGGCCCGAGTAGCCACTCCGCAGTAGGCCCAAGTTTCACAGGCA GGACTGAGCCTAGCAAGTCTCCTGGAAGTTTGCGCTATAGTTACAAAGAGAGTTTTGGGTCAGCTGTACC ACGAAATGTCAGTGGTTATCCTCAGTATCCTTCAGGACAAGAAAAGGGGGATTTTGGCAGCCATGGAGAG CGAAAGGGTAGAAATGAGAAGTTCCCAAGTCTTCTACAGGAAGTGCTTCAGGGCTACCACCACCATCCTG ACAGAAGGTATCCTAGAAGCGCACAGGAACATCAAGGGATGGCTAGTGGCCTGGAAGGAACTGCAAGGCC TAACATCTTAGTCAGTCAAACCAATGAATTAGCTAGCAGGGGCCTTCTGAACAAGAGTATTGGATCCCTG TTGGAAAATCCCCACTGGGGACCATGGGAAAGGAAGTCAAGCAGCACAGCTCCTGAAATGAAACAGATCA ATTTGTCTGACTATCCCATTCCCAGGAAGTTTGAGATAGAACCTCCATCATCAGCCCATGAGCCTGGAGG CTCCCTTTCTGAAAGGAGGTCAGTAATCTGTGATATATCCCCACTAAGACAGATTGTCAGGGACCCAGGG GCTCACTCATTGGGACACATGGGTACTGATGCCAGAATTGGGAGGAATGAACGTCTCAACCCAAGTTTAA GTCAGTCAGTCATTCTTCCTGGTGGGTTGGTGTCCATGGAAACAAAATTGAAATCCCAGAGTGGACAGAT AAAAGAGGAAGACTTTGAACAATCCAAATCTCAAGCTAGTTTCAACAAGAAATCTGGAGACCACTGCCAT CCTACCAGCATCAAACATGAGACTTACCGTGGCAATGCAAGTCCTGGAGCAGCAGCCCATGATTCCATTT CAGACTATGGCCCACAAGATAGCAGGTCCACACCAATGCGGCGGGTCCCTGGTAGAGTTGGTAGCCGGGA GACTATGAGGGGTCGGTCCTCTTCTCAGTACCATGACTTTGCAGAAAAATTGAAGATGTCTCCAGGCAGG AGCAGAGGCCCAGGGGGAGACCCTCATCACATGAACCCACATATGACCTTTTCAGAGAGGGCCAATAGGA GTTCTTTACATGCTCCTTTTTCTCCCAACTCAGAAAGCCTGGCCTCTGCTTACCACACAAACACCAGGGC TCATGCTTATGGGGACCCTAATACCGGTTTGAATTCCCAGCTCCATTATAAGAGACAGATGTACCAACAG CAACAAGAGGAGTATAAAGACTGGGCCAGCAGTTCTGCTCAGGGAGTGATCGCTGCTGCGCAGCATAGGC AGGAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGAGTACGGAGCCCCCTGAAAAATGA CAAAGACGGAATGATGTATGGCCCACCAGTAGGTACGTATCATGACCCAAGCACTCAGGAAGCTGGGCGC TGTCTCATGTCTAGTGATGGTCTGCCTGCCAAAAGCATGGAATTGAAGCACAGCTCTCAGAAGTTACAAG AGTCTTGTTGGGATCTTTCTCGGCAGACTTCTCCAGCCAAAAGCAGTGGTCCTCCAGGAATGTCTAATCA AAAACGGTATGGGCCACCCCATGAGCCAGATGGACATGGACTAGCCGAGTCTGCACAGTCATCCAAACCT AGTAACGTCATGTTACGGCTTCCTGGTCAAGAGGATCATTCTTCTCAAAATCCTTTAATCATGCGAAGGC GGGTTCGTTCTTTTATCTCCCCTATTCCCAGTAAGAGACAGTCACAAGATGTAAAAAACAGTAACGCTGA TGATAAAGGGCGCCTCCTCCACCCATCAAAAGAAGGTGCCGATAAAGCATACAATTCCTACAGCCATCTT TCTCACAGTCAGGATATCAAGTCTATTCCTAAGAGAGATTCCTCCAAGGACCTTCCAAACCCAGACAATA GAAACTGTCCTGCTGTTACCCTGACAAGTCCTGCTAAGACCAAAATACTGCCCCCACGGAAGGGACGGGG ATTAAAATTGGAAGCTATAGTTCAGAAGATCACATCTCCAAATATTAGGAGGAGTGCATCTGCAAACAGT GCTGAGGCTGGGGGAGACACAGTCACACTGGATGATATACTATCTCTAAAGAGTGGTCCTCCTGAAGGTG GCACTGTGGCTACTCAAGAGGCTGAGATGGAAAAGCGAAAGTGTGAGGTGGTATCTGACCTAGTCAGTGT AACTAACCAGGAATCGAATGTTGAGAAGCCTCTTCCAGGGCCTTCTGAAGAGTGGCGTGGCAGTGGGGAT GACAAAGTCAAGACAGAGGCACATGTAGAAACAGCTTCTACTGGAAAGGAACCCTCTGGTACTATGACAT CCACAGCTTCACAGAAGCCTGGTGGTAACCAAGGGAGACCAGATGGTTCCCTGGGTGGGGCAGCACCACT AATCTTTCCTGACTCAAAGAATGTAGCTCCAGTGGGCATATTGGCCCCTGAGGCAAATCCCAAGGCTGAA GAGAAAGAGAACGATACAGTCATGATTTCACCCAAACAAGAAAGTTTCCCCCCTAAAGGGTATTTCCCAT CAGGAAAGAAAAAGGGGAGACCAATCGGTAGTGTCAATAAGCAAAAGAAACAGCAGCAGCAACCACCTCC ACCTCCTCAGCCCCCTCAGATGCCAGAAGGTTCTGCAGATGGGGAGCCAAAGCCAAAAAAGCAGAGGCAA AGGAGGGAGAGAAGGAAGCCTGGGGCCCAGCCAAGGAAGCGGAAAACCAAACAAGCAGTTCCCATTGTAG AACCTCAAGAACCAGAGATCAAGCTAAAGTACGCTACCCAGCCACTAGATAAAACTGATGCCAAGAACAA GTCTTTTTTCCCTTACATCCATGTAGTAAATAAGTGTGAACTTGGAGCTGTTTGTACAATCATCAATGCT GAAGAAGAAGAACAGACCAAATTGGTGAGGAGCCGGAAGGGTCAGAGATCTCTGACCCCTCCCCCCAGCA GCACAGAAAGCAAGGTGCTCCCAGCTTCATCCTTTATGCTGCAGGGGCCTGTGGTAACAGAGTCTTCTGT TATGGGGCACCTGGTTTGCTGTCTCTGTGGCAAGTGGGCCAGTTACCGTAACATGGGTGACCTCTTTGGA CCCTTTTATCCCCAAGATTATGCAGCCACTCTTCCGAAGAATCCACCTCCTAAGAGGTCCTCAGAAATGC AGAGCAAAGTCAAGGTTCGGCACAAAAGCGCTTCTAATGGTTCTAAAACTGACACTGAGGAGGAGGAGGA GCAGCAGCAGCAGAAGGAGCAGAGGAGCCTGGCTGCTCATCCTAGGTTCAAGCGGCGCCACCGCTCAGAA GACTGTGGTGGAGGTCCTCGGTCCCTGTCCAGGGGGCTCCCTTGTAAAAAAGCAGCCACGGAGGGCAGCA GTGAAAAGACTGTTTCAGACACAAAGCCCTCTGTACCTACCACTTCAGAAGGTGGGCCTGAGCTGGAGTT ACAAATCCCTGAACTACCTCTTGACAGCAACGAATTTTGGGTCCATGAGGGTTGTATTCTCTGGGCCAAT GGAATCTACCTGGTCTGTGGCAGGCTCTATGGCCTGCAGGAAGCGCTGGAAATCGCCAGAGAGATGAAAT GCTCCCACTGCCAGGAGGCTGGCGCTACTTTGGGCTGCTACAACAAAGGCTGCTCCTTCCGATACCATTA CCCATGTGCCATTGACGCAGATTGTTTGCTGCATGAGGAGAATTTCTCGGTGAGGTGCCCCAAGCACAAG CCTCCCCTTCCATGCCCTCTCCCCCCCTTGCAGAACAAGACCGCAAAAGGCAGCCTCAGCACAGAGCAGT CCGAGCGGGGGTGA
Translation (1987 aa): MQSFREQSSYHGNQQSYPQEVHSSSRIEEFSPRQAQMFQNFGGAGGGSSGTGSSSSGRRGTAAAAAAMAS ETSGHQGYQGFRKEAGDFYYMAGNKDTVAAGTPQPPQRRPSGPVQSYGPPQGSSFGNQYASEGHVSQFQA QHSALGGVSHYQQDYTGPFSPGSAQYQQQASSQQQQQQQQQQQQQQQQQQQQVQQLRQQLYQSHQPLPQT TGQPASGSSHLQPMQRPSTLPSSAGYQLRVGQFGQHYQSSASSSSSSSFPSPQRFSQSGQSYDGSYSVNA GSQYEGHNVGSNAQAYGTQSNYSYQPQSMKNFEQAKIPPGNQQGQQQQQQQPQPQQQQPQQQQQQQQQQQ HPPQHVMQYTNAATKMPLQSQVGQYNQPEVPVRSPMQFHQNFSPISNPSPAASVVQSPSCSSTPSPLMQS GENLQCGQGNVPMSSRNRILQLMPQLSPTPSMMPSPNSHAAGFKGFGLEGVPEKRLTDPGLSSLSALSSQ VANLPNTVQHMLLSDALTPQKKTSKRPSSSSKKADSCTNSEGSSQPEEQLKSPMAESLDGGCSSSSEDQG ERVRQLSGQSTSSDTTYKCGASEKAGSSPTQGAQNEAPRLSTSPATRDEAASPGAKDTSLSSEGNTKVNE KTVGVIVSREAMTGRVEKSGGQDKGSQEDDPAASQRPPSNSGVKEISHTSLPQPDPPGGGSKGNKNGDNN SSNHNGEGNGPSSHSAVGPSFTGRTEPSKSPGSLRYSYKESFGSAVPRNVSGYPQYPSGQEKGDFGSHGE RKGRNEKFPSLLQEVLQGYHHHPDRRYPRSAQEHQGMASGLEGTARPNILVSQTNELASRGLLNKSIGSL LENPHWGPWERKSSSTAPEMKQINLSDYPIPRKFEIEPPSSAHEPGGSLSERRSVICDISPLRQIVRDPG AHSLGHMGTDARIGRNERLNPSLSQSVILPGGLVSMETKLKSQSGQIKEEDFEQSKSQASFNKKSGDHCH PTSIKHETYRGNASPGAAAHDSISDYGPQDSRSTPMRRVPGRVGSRETMRGRSSSQYHDFAEKLKMSPGR SRGPGGDPHHMNPHMTFSERANRSSLHAPFSPNSESLASAYHTNTRAHAYGDPNTGLNSQLHYKRQMYQQ QQEEYKDWASSSAQGVIAAAQHRQEGPRKSPRQQQFLDRVRSPLKNDKDGMMYGPPVGTYHDPSTQEAGR CLMSSDGLPAKSMELKHSSQKLQESCWDLSRQTSPAKSSGPPGMSNQKRYGPPHEPDGHGLAESAQSSKP SNVMLRLPGQEDHSSQNPLIMRRRVRSFISPIPSKRQSQDVKNSNADDKGRLLHPSKEGADKAYNSYSHL SHSQDIKSIPKRDSSKDLPNPDNRNCPAVTLTSPAKTKILPPRKGRGLKLEAIVQKITSPNIRRSASANS AEAGGDTVTLDDILSLKSGPPEGGTVATQEAEMEKRKCEVVSDLVSVTNQESNVEKPLPGPSEEWRGSGD DKVKTEAHVETASTGKEPSGTMTSTASQKPGGNQGRPDGSLGGAAPLIFPDSKNVAPVGILAPEANPKAE EKENDTVMISPKQESFPPKGYFPSGKKKGRPIGSVNKQKKQQQQPPPPPQPPQMPEGSADGEPKPKKQRQ RRERRKPGAQPRKRKTKQAVPIVEPQEPEIKLKYATQPLDKTDAKNKSFFPYIHVVNKCELGAVCTIINA EEEEQTKLVRSRKGQRSLTPPPSSTESKVLPASSFMLQGPVVTESSVMGHLVCCLCGKWASYRNMGDLFG PFYPQDYAATLPKNPPPKRSSEMQSKVKVRHKSASNGSKTDTEEEEEQQQQKEQRSLAAHPRFKRRHRSE DCGGGPRSLSRGLPCKKAATEGSSEKTVSDTKPSVPTTSEGGPELELQIPELPLDSNEFWVHEGCILWAN GIYLVCGRLYGLQEALEIAREMKCSHCQEAGATLGCYNKGCSFRYHYPCAIDADCLLHEENFSVRCPKHK PPLPCPLPPLQNKTAKGSLSTEQSERG
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