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Report for CCDS49072.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49072.1 Public Mus musculus 12 Fbxo33 23 108 98 CCDS HistoryNCBI Gene:70611Re-query CCDS DB by CCDS ID:49072.1Re-query CCDS DB by GeneID:70611See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49072.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043204.7 ENSMUSP00000035948.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043204.7Link to Ensembl Protein Viewer:ENSMUSP00000035948.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000043204Re-query CCDS DB by Protein ID:ENSMUSP00000035948
Original member Current member NCBI NM_001033156.4 NP_001028328.2 Accepted alive Link to Nucleotide Sequence:NM_001033156.4Link to Protein Sequence:NP_001028328.2Re-query CCDS DB by Nucleotide ID:NM_001033156Re-query CCDS DB by Protein ID:NP_001028328Link to BLAST:NP_001028328.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028328.2 562 Q8VE08 562 100% 0 0

Chromosomal Locations for CCDS 49072.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 59202408 59202679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 59204311 59204996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 59205981 59206091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 59218860 59219479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1689 nt):
ATGTTGTTGTTCTTGTCAGTGCCGCAACCCCGACCGCCGGGAGCGCGAACCCGAGCCGGGGCCGCCCGGT
TGGTGCGGTGGCGGCGGCGGCAGCGGCTGCGGCTGCTGCAGCTGCGCCGGCTGCGGGGGCTGCTGCGAGG
ACTGCGCAGGCGGCCGGGGACGGGCGGCCGGCGGCCGAGCCGGATGGCTCTGTGCGGGCAGGCGGCCGGC
GCCGCGTCGCTGCCCAGCGAGCTCATCGTGCACATCTTCTCCTTTCTGCCGGCGCCCGACCGGCTGCGGG
CCTCGGCCTCCTGCTCGCACTGGCGGGAGTGCCTCTTCTACCCAGCGCTGTGGCCCCAGCTCCGCATCTG
CCTCCGCGTCTCGCCCGCGGAGCAGCCGCGGCTAGAGTTCCTCATGCGCAAGTGCGGCTGGTTCGTGCGG
GAGCTGCGGGTTGAGTTCGCCGCGGAGAATTATCTGAGCGGAGGCGGCGGCCCGGGCGACGGCGGTAGCG
GCGGCGGCACCGACACGGGCACCGGAGGGGAAGACGGGGAGGCCCTGCAGCTCTCCTCCCGCTGGCTGGA
AGTACTGCGCATCTACTTGGAGCTGGTGTTGTGCGTGCTGCTCAGCATCCGGAACAACAGGAATCTCCAG
AAGTTTAGTCTTTTTGGAGACATAAGTGTTGTACACCAGCAAGGAAGTTTGTCCAGCACGTACCTCAGCA
GGGTAGACCCTGACGGCAAGAAGATTAAGCAAATTCAACAACTGTTTGAAGAAATACTGAGCAATAGTAG
GCAACTAAAATGGCTGTCCTGTGGGTTTATGCTGGAAATAGTAACCCCAACATCACTGTCGTCTCTGTCT
AACCCAATTGCCAACACCATGGAACACCTGAGTTTACTGGACAACAACATTCCTGGCAATAGCACTCTGA
TCACTGCAGTGGAACTAGAGCGGTTTGTAAATCTACGCTCACTTGCCCTGGATTTCTGTGACTTTACAGC
TGAAATGGCGAGAGTCTTGACCGATAGCAACCATGTGCCTTTGCAGCGACTGTCTCTTCTGGTCCACAAT
GCTTCAGTGATGCTCAAGTCATTAGACAACATGCCAAATGATGAGCACTGGAAAGCCCTGTCACGAAAGA
GCTCCAGCCTTCGGGTCTATCTAATGGTTTTTGATATTAAAAGTGAAGACATGCTAAAGATTCTGAAACC
CAGTATACCACTTGAGAGGGTTCACTTTGACAGCTACGTCACTTGTGTCTCAGGGGCTATTGTTGATCTT
ATATCCAGGCAGTATGACAAGTTCCTTACCCATTTTATATTGATGAATGATATGATTGACACATCTGGTT
TTCCAGATCTTAGTGACAACCGAAACGAAGATCCATTGGTTTTGTTAGCATGGAGGTGCACAAAGCTCAC
CCTTTTGGCAATTCATGGTTACACCGTGTGGGCGCACAACCTCATTGCCATTGCTCGTCTTCGGGGCTCT
GACCTAAAAGTGCTTCAAGTCACCGAAGAAAGCATTGATTTTGACCAAGGTGAACTAGCCGACCAGGATG
TGGATCCAGTACAGAACCTTATTGAGCAGGTATCACTGGGCCTTGGTCAGTCTTGGCACGCAGTCTTGGA
CATTGAATCACTCAGTGTCTTCACTGAACCAAATCGTCATTTTTACAGAGAGATGCAAAGCTTCAGCGAA
GACATTTAG

Translation (562 aa):
MLLFLSVPQPRPPGARTRAGAARLVRWRRRQRLRLLQLRRLRGLLRGLRRRPGTGGRRPSRMALCGQAAG
AASLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICLRVSPAEQPRLEFLMRKCGWFVR
ELRVEFAAENYLSGGGGPGDGGSGGGTDTGTGGEDGEALQLSSRWLEVLRIYLELVLCVLLSIRNNRNLQ
KFSLFGDISVVHQQGSLSSTYLSRVDPDGKKIKQIQQLFEEILSNSRQLKWLSCGFMLEIVTPTSLSSLS
NPIANTMEHLSLLDNNIPGNSTLITAVELERFVNLRSLALDFCDFTAEMARVLTDSNHVPLQRLSLLVHN
ASVMLKSLDNMPNDEHWKALSRKSSSLRVYLMVFDIKSEDMLKILKPSIPLERVHFDSYVTCVSGAIVDL
ISRQYDKFLTHFILMNDMIDTSGFPDLSDNRNEDPLVLLAWRCTKLTLLAIHGYTVWAHNLIAIARLRGS
DLKVLQVTEESIDFDQGELADQDVDPVQNLIEQVSLGLGQSWHAVLDIESLSVFTEPNRHFYREMQSFSE
DI


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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