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Report for CCDS86522.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86522.1 Public Homo sapiens 16 C16orf87 24 110 108 CCDS HistoryNCBI Gene:388272Re-query CCDS DB by CCDS ID:86522.1Re-query CCDS DB by GeneID:388272See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86522.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394806.6 ENSP00000378285.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394806.6Link to Ensembl Protein Viewer:ENSP00000378285.2Re-query CCDS DB by Nucleotide ID:ENST00000394806Re-query CCDS DB by Protein ID:ENSP00000378285
Original member Current member NCBI NM_001348660.2 NP_001335589.1 Accepted alive Link to Nucleotide Sequence:NM_001348660.2Link to Protein Sequence:NP_001335589.1Re-query CCDS DB by Nucleotide ID:NM_001348660Re-query CCDS DB by Protein ID:NP_001335589Link to BLAST:NP_001335589.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001335589.1 93 Q6PH81-2 93 100% 0 0

Chromosomal Locations for CCDS 86522.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 46802952 46803070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 46824386 46824482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 46831084 46831149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (282 nt):
ATGTCTGCAACTCGAGCCAAGAAAGTGAAGATGGCCACCAAATCATGCCCCGAGTGCGACCAACAGGTTC
CTGTTGCATGTAAATCATGTCCTTGTGGTTACATATTTATTAGCAGAAAACTTTTAAATGCAAAACACTC
AGAGAAATCACCACCTTCTACAGAGAAACAGGAAAAGGAAATTGACATCTATGCTAACCTGTCTGATGAA
AAGGCTTTCGTGTTTTCAGTCGCCTTGGCAGAAATAAATAGAAAAATTATCAATCAAAGACTTATTCTCT
GA

Translation (93 aa):
MSATRAKKVKMATKSCPECDQQVPVACKSCPCGYIFISRKLLNAKHSEKSPPSTEKQEKEIDIYANLSDE
KAFVFSVALAEINRKIINQRLIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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