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Report for CCDS32506.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32506.1 Public Homo sapiens 16 CTU2 24 110 108 CCDS HistoryNCBI Gene:348180Re-query CCDS DB by CCDS ID:32506.1Re-query CCDS DB by GeneID:348180See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32506.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312060.9 ENSP00000308617.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000312060.9Link to Ensembl Protein Viewer:ENSP00000308617.5Re-query CCDS DB by Nucleotide ID:ENST00000312060Re-query CCDS DB by Protein ID:ENSP00000308617
Original member Current member NCBI NM_001012762.3 NP_001012780.1 Accepted alive Link to Nucleotide Sequence:NM_001012762.3Link to Protein Sequence:NP_001012780.1Re-query CCDS DB by Nucleotide ID:NM_001012762Re-query CCDS DB by Protein ID:NP_001012780Link to BLAST:NP_001012780.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012780.1 485 Q2VPK5-5 485 100% 0 0

Chromosomal Locations for CCDS 32506.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 88706531 88706598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88707136 88707210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88709938 88710016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88710223 88710282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88711635 88711695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88712274 88712383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88712622 88712905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88713312 88713447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88713647 88713778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88714136 88714227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88714383 88714486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88714587 88714737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88714860 88714926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88715182 88715220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1458 nt):
ATGTGTCAGGTGGGCGAGGACTACGGGGAGCCGGCGCCTGAGGAGCCGCCCCCGGCGCCGCGGCCCAGCC
GT
GAGCAGAAGTGTGTGAAGTGCAAGGAAGCGCAGCCCGTTGTGGTGATACGAGCCGGAGATGCCTTCTG
C
AGGGACTGTTTCAAGGCCTTCTACGTCCACAAGTTCAGAGCCATGCTGGGCAAGAACCGGCTCATCTTT
CCA
GGCGAGAAGGTGCTCTTGGCGTGGTCTGGGGGGCCTTCGTCCAGCTCCATGGTCTGGCAGGTTCTTG
AG
GGCCTGAGCCAAGATTCTGCCAAAAGACTGCGCTTTGTGGCAGGAGTCATCTTTGTTGACGAGGGAGC
A
GCCTGTGGCCAGAGCCTAGAGGAGAGATCAAAGACCCTGGCCGAAGTGAAGCCCATTCTGCAAGCAACT
GGG
TTCCCATGGCATGTGGTGGCCTTAGAGGAGGTGTTCAGCCTGCCACCGTCGGTGCTTTGGTGCTCTG
CC
CAGGAGCTGGTGGGATCCGAGGGGGCCTACAAGGCGGCCGTGGACAGCTTCCTCCAGCAGCAGCATGT
G
CTGGGGGCCGGGGGTGGTCCTGGCCCGACTCAAGGGGAGGAACAGCCACCCCAGCCCCCGCTGGACCCC
CAG
AACCTGGCAAGACCGCCTGCCCCTGCCCAGACTGAGGCTCTTTCCCAACTGTTCTGCTCAGTGAGGA
CA
CTGACTGCCAAGGAGGAGCTTCTGCAGACCCTGCGGACCCACCTGATCCTCCACATGGCCCGAGCCCA
C
GGCTACTCCAAGGTCATGACTGGGGACAGCTGCACACGCTTGGCTATCAAGCTCATGACCAACCTGGCG
CTG
GGTCGAGGGGCCTTCCTGGCCTGGGATACGGGCTTCTCGGATGAGCGGCACGGGGACGTGGTGGTGG
TG
CGGCCCATGCGGGACCACACCCTGAAGGAGGTCGCTTTCTACAACCGCCTGTTCTCCGTTCCTTCTGT
C
TTCACACCAGCCGTCGACACCAAGGCCCCTGAAAAGGCCAGCATCCACCGGCTGATGGAGGCCTTCATC
CTC
AGGCTGCAGACCCAGTTCCCCTCCACTGTCAGCACTGTGTACAGGACAAGTGAGAAGCTGGTGAAGG
GC
CCCCGGGATGGCCCTGCTGCTGGCGACTCCGGCCCCCGCTGCCTCCTCTGCATGTGTGCCCTGGACGT
C
GACGCCGCTGACAGTGCCACGGCTTTTGGGGCTCAGACCTCCTCGCGTCTCTCCCAGATGCAGTCACCC
ATC
CCCCTGACTGAGACCCGGACACCCCCGGGGCCCTGCTGTTCTCCAGGGGTGGGCTGGGCCCAGCGCT
GT
GGCCAGGGGGCCTGCAGGAGGGAGGACCCCCAAGCCTGCATTGAGGAGCAGCTGTGCTACAGCTGCCG
C
GTGAACATGAAGGACTTGGGCCTGGGGCTTGCAGGAGATCCGGGACTGTCTGATTGA


Translation (485 aa):
MCQVGEDYGEPAPEEPPPAPRPSREQKCVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIF
P
GEK
VLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQAT
G
FPWHVVALEE
VFSLPPSVLWCSAQELVGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQGEEQPPQPPLDP
Q
NLARPPAPAQTEALSQLFCSVRTLTAKEELLQTL
RTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLA
L
GRGAFLAWDT
GFSDERHGDVVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIHRLMEAFI
L
RLQTQFPSTVSTVY
RTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAADSATAFGAQTSSRLSQMQSP
I
PLTETRTPPGPCCSPGVGWAQRCGQGACR
REDPQACIEEQLCYSCRVNMKDLGLGLAGDPGLSD



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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