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Report for CCDS3326.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3326.1 Public Homo sapiens 3 MELTF 24 110 108 CCDS HistoryNCBI Gene:4241Re-query CCDS DB by CCDS ID:3326.1Re-query CCDS DB by GeneID:4241See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3326.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296351.8 ENSP00000296351.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000296351.8Link to Ensembl Protein Viewer:ENSP00000296351.4Re-query CCDS DB by Nucleotide ID:ENST00000296351Re-query CCDS DB by Protein ID:ENSP00000296351
Original member Current member NCBI NM_033316.4 NP_201573.1 Accepted alive Link to Nucleotide Sequence:NM_033316.4Link to Protein Sequence:NP_201573.1Re-query CCDS DB by Nucleotide ID:NM_033316Re-query CCDS DB by Protein ID:NP_201573Link to BLAST:NP_201573.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_201573.1 302 P08582-2 302 100% 0 0

Chromosomal Locations for CCDS 3326.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 197019605 197019801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197021404 197021471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197022957 197023113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197024303 197024485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197026660 197026759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197027756 197027910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197029654 197029702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (909 nt):
ATGCGGGGTCCGAGCGGGGCTCTGTGGCTGCTCCTGGCTCTGCGCACCGTGCTCGGTGGCATGGAGGTGC
GGTGGTGCGCCACCTCGGACCCAGAGCAGCACAAGTGCGGCAACATGAGCGAGGCCTTCCGGGAAGCGGG
CATCCAGCCCTCCCTCCTCTGCGTCCGGGGCACCTCCGCCGACCACTGCGTCCAGCTCATCGCGGCCCAG
GAGGCTGACGCCATCACTCTGGATGGAGGAGCCATCTATGAGGCGGGAAAGGAGCACGGCCTGAAGCCGG
TGGTGGGCGAAGTGTACGATCAAGAGGTCGGTACCTCCTATTACGCCGTGGCTGTGGTCAGGAGGAGCTC
CCATGTGACCATTGACACCCTGAAAGGCGTGAAGTCCTGCCACACGGGCATCAATCGCACAGTGGGCTGG
AACGTGCCCGTGGGCTACCTGGTGGAGAGCGGCCGCCTCTCGGTGATGGGCTGCGATGTACTCAAAGCTG
TCAGCGACTATTTTGGGGGCAGCTGCGTCCCGGGGGCAGGAGAGACCAGTTACTCTGAGTCCCTCTGTCG
CCTCTGCAGGGGTGACAGCTCTGGGGAAGGGGTGTGTGACAAGAGCCCCCTGGAGAGATACTACGACTAC
AGCGGGGCCTTCCGGTGCCTGGCGGAAGGGGCAGGGGACGTGGCTTTTGTGAAGCACAGCACGGTACTGG
AGAACACGGATGAAAGTCCATCACGAAGGCAAACATGGACCAGATCTGAGGAGGAAGAAGGCGAGTGCCC
TGCACACGAGGAAGCACGTAGGACGATGCGCTCTAGTGCTGGGCAAGCCTGGAAATGGGCTCCCGTTCAC
AGGCCCCAGGACGAGTCTGACAAAGGAGAATTTGGAAAACGGGCAAAGAGTAGGGATATGTTGGGTTAA

Translation (302 aa):
MRGPSGALWLLLALRTVLGGMEVRWCATSDPEQHKCGNMSEAFREAGIQPSLLCVRGTSADHCVQLIAAQ
EADAITLDGGAIYEAGKEHGLKPVVGEVYDQEVGTSYYAVAVVRRSSHVTIDTLKGVKSCHTGINRTVGW
NVPVGYLVESGRLSVMGCDVLKAVSDYFGGSCVPGAGETSYSESLCRLCRGDSSGEGVCDKSPLERYYDY
SGAFRCLAEGAGDVAFVKHSTVLENTDESPSRRQTWTRSEEEEGECPAHEEARRTMRSSAGQAWKWAPVH
RPQDESDKGEFGKRAKSRDMLG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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