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Report for CCDS92884.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92884.1 Public Homo sapiens 2 COBLL1 24 110 108 CCDS HistoryNCBI Gene:22837Re-query CCDS DB by CCDS ID:92884.1Re-query CCDS DB by GeneID:22837See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92884.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409184.8 ENSP00000387326.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409184.8Link to Ensembl Protein Viewer:ENSP00000387326.5Re-query CCDS DB by Nucleotide ID:ENST00000409184Re-query CCDS DB by Protein ID:ENSP00000387326
Original member Current member NCBI NM_001278460.2 NP_001265389.1 Accepted alive Link to Nucleotide Sequence:NM_001278460.2Link to Protein Sequence:NP_001265389.1Re-query CCDS DB by Nucleotide ID:NM_001278460Re-query CCDS DB by Protein ID:NP_001265389Link to BLAST:NP_001265389.1

Chromosomal Locations for CCDS 92884.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 164685946 164686032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164692221 164692397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164694269 164695836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164699405 164699499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164700522 164700756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164704444 164704518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164704952 164705105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164722075 164722311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164722425 164722522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164727969 164728197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164729914 164730115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164743687 164743875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164841156 164841246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164841957 164842044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3525 nt):
ATGCCGCCGAGCTGGTCCCCACTTATGTGCGGCCGTGCTGCAGAGGCGGCGGCGAGCTCCCGGACTCCGG
GCAGGGAAATGGGGCAGGCAGTGACGCGCCGCCTGGGAGCTGGAGCCCGCGCAGCGCCCCGCAGGGCGAT
GGACGGCCGAACCCCGCGCCCGCAGGACGCCCCAGCCAGGAGAAAACCAAAAGCCAAGGCACCACTTCCT
CCAGCTGAGACCAAATATACTGATGTCTCTTCAGCTGCTGATTCTGTAGAATCCACTGCTTTCATCATGG
AACAGAAAGAAAACATGATAGATAAAGACGTTGAACTCTCAGTGGTCCTACCTGGGGATATTATCAAATC
TACTACTGTTCATGGCAGTAAACCTATGATGGACTTGTTGATATTCCTTTGTGCACAGTATCACTTAAAT
CCATCAAGTTACACAATCGATCTGTTGTCAGCTGAACAGAACCACATTAAATTTAAGCCAAACACACCAA
TAGGAATGTTGGAGGTAGAGAAGGTAATTTTAAAGCCAAAAATGTTGGATAAGAAAAAACCTACACCTAT
AATACCAGAGAAAACTGTGAGAGTAGTGATTAATTTTAAGAAAACACAGAAGACCATAGTGAGAGTGAGT
CCACATGCATCGCTTCAAGAGCTTGCCCCTATTATATGTAGCAAATGTGAGTTTGATCCGTTGCATACAC
TATTGTTGAAAGATTATCAATCGCAGGAGCCTCTTGACTTGACAAAATCTCTTAATGACCTGGGACTAAG
AGAATTATATGCGATGGATGTCAACAGAGAGTCCTGCCAAATATCACAAAACCTAGATATTATGAAGGAG
AAAGAAAATAAAGGGTTTTTCAGTTTTTTTCAACGCAGTAAGAAAAAGCGAGACCAAACTGCAAGTGCCC
CTGCAACCCCTCTAGTAAATAAGCACCGCCCAACTTTTACAAGGTCCAATACCATTTCCAAACCATATAT
TTCCAACACCCTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTCCACTGCCCCCGATGCCAGCATCTCAG
AGTGTCCCCCAAGACCTTGCACACATCCAGGAGAGGCCTGCTTCTTGTATAGTGAAATCCATGAGCGTGG
ATGAGACAGATAAGAGTCCCTGTGAAGCAGGAAGAGTGAGGGCAGGTTCACTGCAGCTCAGCAGCATGTC
TGCAGGGAATTCATCTTTGAGAAGGACAAAGCGAAAAGCACCTTCCCCACCCTCCAAAATACCCCCGCAT
CAAAGTGATGAAAATAGTCGTGTGACTGCCTTACAGCCAGTAGATGGAGTTCCTCCAGACAGTGCTTCAG
AAGCAAACTCTCCTGAGGAGCTATCCAGCCCAGCTGGAATAAGCTCTGATTATAGCCTTGAAGAGATAGA
TGAAAAGGAAGAACTGAGTGAAGTGCCTAAAGTTGAAGCTGAAAATATTTCTCCGAAGTCACAAGATATT
CCTTTTGTATCTACTGATATAATAAATACACTGAAAAATGATCCTGACTCAGCCCTTGGCAATGGTAGTG
GAGAGTTCTCACAAAACTCCATGGAAGAAAAACAAGAAACTAAAAGCACAGATGGACAAGAACCACACAG
TGTAGTATATGATACAAGCAATGGAAAGAAGGTAGTTGACAGTATAAGAAACTTGAAGTCGTTGGGCCCA
AACCAAGAGAATGTAGTTCAAAATGAAATAATTGTCTATCCAGAGAACACAGAAGACAATATGAAAAATG
GAGTGAAGAAAACAGAAATCAATGTAGAAGGTGTTGCCAAAAATAACAACATTGATATGGAAGTTGAGAG
ACCATCAAACTCTGAGGCACATGAAACTGATACTGCTATAAGTTACAAGGAAAACCATCTAGCAGCTTCA
TCAGTACCAGATCAAAAACTGAATCAACCCAGTGCAGAAAAGACAAAAGATGCAGCAATTCAGACAACCC
CTTCTTGTAACAGTTTTGATGGGAAACACCAAGATCATAATTTATCTGACTCCAAAGTTGAAGAATGTGT
GCAAACTTCAAATAACAACATATCAACTCAACACTCATGCTTAAGTTCACAAGATTCTGTAAATACCTCA
AGGGAATTCAGGAGTCAAGGCACCCTAATTATACATTCAGAAGATCCGCTTACCGTAAAAGATCCAATTT
GTGCACATGGTAATGATGATCTTTTGCCTCCTGTAGATAGGATTGACAAAAATTCCACTGCTTCTTACCT
AAAGAATTACCCACTTTATAGACAGGACTACAATCCCAAGCCAAAACCTTCAAATGAAATTACACGAGAG
TATATACCCAAAATTGGCATGACTACTTATAAAATAGTGCCTCCCAAATCCTTGGAAATATCGAAAGACT
GGCAATCAGAAACCATAGAGTATAAAGATGATCAGGACATGCATGCTTTAGGGAAAAAGCACACTCATGA
GAATGTGAAAGAAACTGCCATCCAAACAGAAGATTCTGCTATTTCTGAAAGCCCAGAAGAGCCACTGCCA
AACCTTAAACCGAAGCCTAACCTGAGAACAGAGCATCAAGTGCCCAGTTCTGTGAGCTCACCTGATGATG
CCATGGTTAGTCCTCTGAAACCTGCTCCCAAAATGACAAGAGACACTGGCACAGCTCCTTTTGCACCAAA
TTTGGAAGAAATAAACAATATTTTGGAATCAAAATTTAAATCTCGGGCTTCAAATGCCCAGGCCAAACCC
AGCTCTTTTTTTTTGCAGATGCAGAAGAGAGTATCGGGTCACTATGTGACATCTGCAGCTGCCAAGAGTG
TCCATGCTGCCCCTAATCCTGCTCCAAAAGAACTGACAAATAAAGAGGCAGAAAGGGATATGCTGCCTTC
TCCGGAGCAGACTCTTTCTCCCTTAAGTAAAATGCCTCACTCTGTTCCACAACCCCTTGTTGAAAAAACT
GATGATGATGTCATCGGTCAGGCTCCTGCTGAAGCCTCCCCTCCTCCCATAGCTCCAAAACCTGTGACAA
TTCCTGCTAGTCAGGTATCCACACAAAATCTGAAGACTTTGAAAACTTTTGGTGCCCCACGACCATACTC
AAGTTCTGGTCCTTCACCGTTTGCTCTTGCTGTAGTGAAAAGGTCACAGTCTTTCAGTAAAGAGCGCACC
GAGTCACCTAGTGCCAGTGCATTGGTCCAACCTCCAGCCAACACAGAGGAAGGGAAGACTCATTCTGTAA
ATAAATTTGTGGACATCCCACAGCTTGGTGTGTCTGATAAGGAAAATAACTCTGCACATAATGAACAGAA
TTCCCAAATACCAACTCCAACTGATGGCCCATCATTCACTGTTATGAGACAAAGTTCTTTAACATTCCAA
AGCTCTGACCCAGAACAGATGCGACAGAGTTTGCTGACTGCAATCCGTTCGGGAGAGGCTGCTGCCAAAT
TGAAAAGGGTTACCATTCCATCAAATACAATATCTGTGAATGGAAGGTCAAGACTCAGCCATTCCATGTC
CCCTGATGCCCAGGACGGCCATTAA

Translation (1174 aa):
MPPSWSPLMCGRAAEAAASSRTPGREMGQAVTRRLGAGARAAPRRAMDGRTPRPQDAPARRKPKAKAPLP
PAETKYTDVSSAADSVESTAFIMEQKENMIDKDVELSVVLPGDIIKSTTVHGSKPMMDLLIFLCAQYHLN
PSSYTIDLLSAEQNHIKFKPNTPIGMLEVEKVILKPKMLDKKKPTPIIPEKTVRVVINFKKTQKTIVRVS
PHASLQELAPIICSKCEFDPLHTLLLKDYQSQEPLDLTKSLNDLGLRELYAMDVNRESCQISQNLDIMKE
KENKGFFSFFQRSKKKRDQTASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPKKRRAPLPPMPASQ
SVPQDLAHIQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSKIPPH
QSDENSRVTALQPVDGVPPDSASEANSPEELSSPAGISSDYSLEEIDEKEELSEVPKVEAENISPKSQDI
PFVSTDIINTLKNDPDSALGNGSGEFSQNSMEEKQETKSTDGQEPHSVVYDTSNGKKVVDSIRNLKSLGP
NQENVVQNEIIVYPENTEDNMKNGVKKTEINVEGVAKNNNIDMEVERPSNSEAHETDTAISYKENHLAAS
SVPDQKLNQPSAEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVEECVQTSNNNISTQHSCLSSQDSVNTS
REFRSQGTLIIHSEDPLTVKDPICAHGNDDLLPPVDRIDKNSTASYLKNYPLYRQDYNPKPKPSNEITRE
YIPKIGMTTYKIVPPKSLEISKDWQSETIEYKDDQDMHALGKKHTHENVKETAIQTEDSAISESPEEPLP
NLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPKMTRDTGTAPFAPNLEEINNILESKFKSRASNAQAKP
SSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKT
DDDVIGQAPAEASPPPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQSFSKERT
ESPSASALVQPPANTEEGKTHSVNKFVDIPQLGVSDKENNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQ
SSDPEQMRQSLLTAIRSGEAAAKLKRVTIPSNTISVNGRSRLSHSMSPDAQDGH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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