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Report for CCDS94721.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94721.1 Public Homo sapiens X MAGEA11 24 110 108 CCDS HistoryNCBI Gene:4110Re-query CCDS DB by CCDS ID:94721.1Re-query CCDS DB by GeneID:4110See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 94721.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333104.8 ENSP00000328177.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000333104.8Link to Ensembl Protein Viewer:ENSP00000328177.4Re-query CCDS DB by Nucleotide ID:ENST00000333104Re-query CCDS DB by Protein ID:ENSP00000328177
Original member Current member NCBI NM_001011544.2 NP_001011544.1 Accepted alive Link to Nucleotide Sequence:NM_001011544.2Link to Protein Sequence:NP_001011544.1Re-query CCDS DB by Nucleotide ID:NM_001011544Re-query CCDS DB by Protein ID:NP_001011544Link to BLAST:NP_001011544.1

Chromosomal Locations for CCDS 94721.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 149688976 149688984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 149714481 149714576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 149715604 149715677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 149715753 149716776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1203 nt):
ATGAGCAAGGTGAGCACTATGTTCTCAGAGGACGACTTCCAGTCAACAGAAAGAGCCCCATATGGTCCAC
AACTACAGTGGTCCCAGGATCTGCCAAGAGTCCAGGTTTTTAGAGAACAGGCCAACCTGGAGGACAGGAG
TCCCAGGAGAACCCAGAGGATCACTGGAGGAGAACAAGTGCTGTGGGGCCCCATCACCCAGATATTTCCC
ACAGTTCGGCCTGCTGACCTAACCAGAGTCATCATGCCTCTTGAGCAAAGAAGTCAGCACTGCAAGCCTG
AGGAAGGCCTTCAGGCCCAAGAAGAAGACCTGGGCCTGGTGGGTGCACAGGCTCTCCAAGCTGAGGAGCA
GGAGGCTGCCTTCTTCTCCTCTACTCTGAATGTGGGCACTCTAGAGGAGTTGCCTGCTGCTGAGTCACCA
AGTCCTCCCCAGAGTCCTCAGGAAGAGTCCTTCTCTCCCACTGCCATGGATGCCATCTTTGGGAGCCTAT
CTGATGAGGGCTCTGGCAGCCAAGAAAAGGAGGGGCCAAGTACCTCGCCTGACCTGATAGACCCTGAGTC
CTTTTCCCAAGATATACTACATGACAAGATAATTGATTTGGTTCATTTATTGCTCCGCAAGTATCGAGTC
AAGGGGCTGATCACAAAGGCAGAAATGCTGGGGAGTGTCATCAAAAATTATGAGGACTACTTTCCTGAGA
TATTTAGGGAAGCCTCTGTATGCATGCAACTGCTCTTTGGCATTGATGTGAAGGAAGTGGACCCCACTAG
CCACTCCTATGTCCTTGTCACCTCCCTCAACCTCTCTTATGATGGCATACAGTGTAATGAGCAGAGCATG
CCCAAGTCTGGCCTCCTGATAATAGTCCTGGGTGTAATCTTCATGGAGGGGAACTGCATCCCTGAAGAGG
TTATGTGGGAAGTCCTGAGCATTATGGGGGTGTATGCTGGAAGGGAGCACTTCCTCTTTGGGGAGCCCAA
GAGGCTCCTTACCCAAAATTGGGTGCAGGAAAAGTACCTGGTGTACCGGCAGGTGCCCGGCACTGATCCT
GCATGCTATGAGTTCCTGTGGGGTCCAAGGGCCCACGCTGAGACCAGCAAGATGAAAGTTCTTGAGTACA
TAGCCAATGCCAATGGGAGGGATCCCACTTCTTACCCATCCCTGTATGAAGATGCTTTGAGAGAGGAGGG
AGAGGGAGTCTGA

Translation (400 aa):
MSKVSTMFSEDDFQSTERAPYGPQLQWSQDLPRVQVFREQANLEDRSPRRTQRITGGEQVLWGPITQIFP
TVRPADLTRVIMPLEQRSQHCKPEEGLQAQEEDLGLVGAQALQAEEQEAAFFSSTLNVGTLEELPAAESP
SPPQSPQEESFSPTAMDAIFGSLSDEGSGSQEKEGPSTSPDLIDPESFSQDILHDKIIDLVHLLLRKYRV
KGLITKAEMLGSVIKNYEDYFPEIFREASVCMQLLFGIDVKEVDPTSHSYVLVTSLNLSYDGIQCNEQSM
PKSGLLIIVLGVIFMEGNCIPEEVMWEVLSIMGVYAGREHFLFGEPKRLLTQNWVQEKYLVYRQVPGTDP
ACYEFLWGPRAHAETSKMKVLEYIANANGRDPTSYPSLYEDALREEGEGV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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