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Report for CCDS1056.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
1056.1 |
Public |
Homo sapiens |
1 |
CREB3L4 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:148327](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:1056.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:148327](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 1056.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000271889.8 |
ENSP00000271889.4 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000271889.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000271889.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000271889](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000271889](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000368603.5 |
ENSP00000357592.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000368603.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000357592.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000368603](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000357592](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000368607.8 |
ENSP00000357596.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000368607.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000357596.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000368607](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000357596](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001255978.2 |
NP_001242907.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001255978.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001242907.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001255978](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001242907](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001242907.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001255979.2 |
NP_001242908.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001255979.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001242908.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001255979](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001242908](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001242908.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_130898.4 |
NP_570968.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_130898.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_570968.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_130898](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_570968](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_570968.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 1056.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1188 nt): ATGGATCTCGGAATCCCTGACCTGCTGGACGCGTGGCTGGAGCCCCCAGAGGATATCTTCTCGACAGGAT CCGTCCTGGAGCTGGGACTCCACTGCCCCCCTCCAGAGGTTCCGGTAACTAGGCTACAGGAACAGGGACT GCAAGGCTGGAAGTCCGGTGGGGACCGTGGCTGTGGCCTTCAAGAGAGTGAGCCTGAAGATTTCTTGAAG CTTTTCATTGATCCCAATGAGGTGTACTGCTCAGAAGCATCTCCTGGCAGTGACAGTGGCATCTCTGAGG ACCCCTGCCATCCAGACAGTCCCCCTGCCCCCAGGGCAACCAGTTCTCCTATGCTCTATGAGGTTGTCTA TGAGGCAGGGGCCCTGGAGAGGATGCAGGGGGAAACTGGGCCAAATGTAGGCCTTATCTCCATCCAGCTA GATCAGTGGAGCCCAGCATTTATGGTGCCTGATTCCTGCATGGTCAGTGAGCTGCCCTTTGATGCTCATG CCCACATCCTGCCCAGAGCAGGCACCGTAGCCCCAGTGCCCTGTACAACCCTGCTGCCCTGTCAAACCCT GTTCCTGACCGATGAGGAGAAGCGTCTGCTGGGGCAGGAAGGGGTTTCCCTGCCCTCTCACCTGCCCCTC ACCAAGGCAGAGGAGAGGGTCCTCAAGAAGGTCAGGAGGAAAATCCGTAACAAGCAGTCAGCTCAGGACA GTCGGCGGCGGAAGAAGGAGTACATTGATGGGCTGGAGAGCAGGGTGGCAGCCTGTTCTGCACAGAACCA AGAATTACAGAAAAAAGTCCAGGAGCTGGAGAGGCACAACATCTCCTTGGTAGCTCAGCTCCGCCAGCTG CAGACGCTAATTGCTCAAACTTCCAACAAAGCTGCCCAGACCAGCACTTGTGTTTTGATTCTTCTTTTTT CCCTGGCTCTCATCATCCTGCCCAGCTTCAGTCCATTCCAGAGTCGACCAGAAGCTGGGTCTGAGGATTA CCAGCCTCACGGAGTGACTTCCAGAAATATCCTGACCCACAAGGACGTAACAGAAAATCTGGAGACCCAA GTGGTAGAGTCCAGACTGAGGGAGCCACCTGGAGCCAAGGATGCAAATGGCTCAACAAGGACACTGCTTG AGAAGATGGGAGGGAAGCCAAGACCCAGTGGGCGCATCCGGTCCGTGCTGCATGCAGATGAGATGTGA
Translation (395 aa): MDLGIPDLLDAWLEPPEDIFSTGSVLELGLHCPPPEVPVTRLQEQGLQGWKSGGDRGCGLQESEPEDFLK LFIDPNEVYCSEASPGSDSGISEDPCHPDSPPAPRATSSPMLYEVVYEAGALERMQGETGPNVGLISIQL DQWSPAFMVPDSCMVSELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPL TKAEERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQLRQL QTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHGVTSRNILTHKDVTENLETQ VVESRLREPPGAKDANGSTRTLLEKMGGKPRPSGRIRSVLHADEM
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