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Report for CCDS42909.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42909.1 Public Homo sapiens 21 C21orf91 24 110 108 CCDS HistoryNCBI Gene:54149Re-query CCDS DB by CCDS ID:42909.1Re-query CCDS DB by GeneID:54149See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42909.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000400558.7 ENSP00000383403.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400558.7Link to Ensembl Protein Viewer:ENSP00000383403.3Re-query CCDS DB by Nucleotide ID:ENST00000400558Re-query CCDS DB by Protein ID:ENSP00000383403
Original member Current member NCBI NM_001100421.2 NP_001093891.1 Accepted alive Link to Nucleotide Sequence:NM_001100421.2Link to Protein Sequence:NP_001093891.1Re-query CCDS DB by Nucleotide ID:NM_001100421Re-query CCDS DB by Protein ID:NP_001093891Link to BLAST:NP_001093891.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001093891.1 221 Q9NYK6-2 221 100% 0 0

Chromosomal Locations for CCDS 42909.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 17793580 17793581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 17796582 17797118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 17818192 17818318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (666 nt):
ATGAACGAAGAGGAGCAGTTTGTAAACATTGATTTGAATGATGACAACATTTGCAGTGTTTGTAAACTGG
GAACAGACAAAGAAACACTCTCCTTCTGCCACATTTGTTTTGAGCTAAATATTGAGGGGGTACCAAAGTC
TGATCTCTTGCACACCAAATCATTAAGGGGCCATAAAGACTGCTTTGAAAAATACCATTTAATTGCAAAC
CAGGGTTGTCCTCGATCTAAGCTTTCAAAAAGTACTTATGAAGAAGTTAAAACCATTTTGAGTAAGAAGA
TAAACTGGATTGTGCAGTATGCACAAAATAAGGATCTGGATTCAGATTCTGAATGTTCTAAAAACCCCCA
GCATCATCTGTTTAATTTCAGGCATAAGCCAGAAGAAAAATTACTCCCACAGTTTGACTCCCAAGTACCA
AAATATTCTGCAAAATGGATAGATGGAAGTGCAGGTGGCATCTCTAACTGTACACAAAGAATTTTGGAGC
AGAGGGAAAATACAGACTTTGGACTTTCTATGTTACAAGATTCAGGTGCCACTTTATGTCGTAACAGTGT
ATTGTGGCCTCATAGTCACAACCAGGCACAGAAAAAAGAAGAGACAATCTCTAGTCCAGAGGCTAATGTC
CAGACCCAGCATCCACATTACAGCAGAGAGGAATAA

Translation (221 aa):
MNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNIEGVPKSDLLHTKSLRGHKDCFEKYHLIAN
QGCPRSKLSKSTYEEVKTILSKKINWIVQYAQNKDLDSDSECSKNPQHHLFNFRHKPEEKLLPQFDSQVP
KYSAKWIDGSAGGISNCTQRILEQRENTDFGLSMLQDSGATLCRNSVLWPHSHNQAQKKEETISSPEANV
QTQHPHYSREE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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