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Report for CCDS61738.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61738.1 Public Homo sapiens 15 FSD2 24 110 108 CCDS HistoryNCBI Gene:123722Re-query CCDS DB by CCDS ID:61738.1Re-query CCDS DB by GeneID:123722See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61738.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000541889.1 ENSP00000444078.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541889.1Link to Ensembl Protein Viewer:ENSP00000444078.1Re-query CCDS DB by Nucleotide ID:ENST00000541889Re-query CCDS DB by Protein ID:ENSP00000444078
Original member Current member NCBI NM_001281805.2 NP_001268734.1 Accepted alive Link to Nucleotide Sequence:NM_001281805.2Link to Protein Sequence:NP_001268734.1Re-query CCDS DB by Nucleotide ID:NM_001281805Re-query CCDS DB by Protein ID:NP_001268734Link to BLAST:NP_001268734.1
Original member Current member NCBI NM_001281806.2 NP_001268735.1 Accepted alive Link to Nucleotide Sequence:NM_001281806.2Link to Protein Sequence:NP_001268735.1Re-query CCDS DB by Nucleotide ID:NM_001281806Re-query CCDS DB by Protein ID:NP_001268735Link to BLAST:NP_001268735.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001268734.1 704 A1L4K1-2 704 100% 0 0
NP_001268735.1 704 A1L4K1-2 704 100% 0 0

Chromosomal Locations for CCDS 61738.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82759348 82759600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82762102 82762278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82765166 82765298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82765898 82766031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82768880 82769030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82772073 82772228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82778766 82778887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82780245 82780267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82782795 82783025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82786511 82786606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82786752 82787390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2115 nt):
ATGGAGGAGGAATCGGGGGAGGAACTGGGGCTGGACAGGTCTACTCCCAAGGATTTCCACTTTTACCACA
TG
GACCTGTATGACTCTGAAGACAGACTGCACCTCTTTCCAGAAGAGAACACTAGGATGAGGAAAGTAGT
C
CAAGCTGAAATGGCCAATGAGTCAAGAGGAGCAGGGGATGGTAAGGCTCAAAGAGACCTTCAAGAGGAA
GTG
GATGAACTTGTCCACTTATATGGACTTGAAGATGATCATGAATTAGGGGATGAGTTTGTTGATGAAA
AC
ATACCCAGAACAGGGGTTTCAGAATATCCTCCTTATATGATGAAGAGGAGAGACCCAGCCAGGGAGCA
G
AGAGACTGGAGACTTAGTGGAGAGGCAGCGGAGGCCGAGGACCTGGGCTTCGGAGGGTGGGGCTCAGCA
GGC
CAGTGCCAGGACTTGCGGGAAGCCTATAGGTACACACACGGCCGTGCCAGCGAGGAGTATGAATGCT
AT
GTCATCCCCGAGGAAGAGGATGAAGAAGAAGCTGCTGATGTCTTCTGTGTCACTTGTAAGACTCCAAT
A
AGAGCTTTTCAGAAGGTTTTTGATGAACATAAGGAGCATGAAGTGATCCCACTCAATGAAGCACTGGAA
AGT
GCCAAGGATGAAATTCACAAAAACATGTACAAATTGGAAAAGCAGATAATTGAGATGGAAAACTTTG
CA
AATCATTTGGAGGAGGTTTTCATCACTGTGGAGGAGAATTTTGGAAAACAAGAACAAAACTTTGAGTC
A
CATTACAACGAGATCTTGGAAACACTTGCTCAAAAATATGAGGAAAAAATACAAGCTCTAGGGGAGAAA
AAG
AAAGAGAAGCTGGAAGCCTTATATGGACAACTGGTCAGCTGTGGAGAAAACCTAGATACTTGCAAAG
AA
CTGATGGAAACAATAGAGGAGATGTGTCACGAGGAGAAGGTGGATTTCATAAAGGATGCAGTGGCTAT
G
GCTGACAGACTCGGGAAATTCCTGAAAACAAAAACAGACGTGGAAATCTCTGCACAGCCTGAGTTTGAA
GAC
CAGACCTTGGATTTCTCTGATGTGGAGCAGCTGATGGGCTCCATTAACACCATTCCAGCTCCTTCTG
CT
CCAGTCATAAATCCACAGGTCCCTAACTCAGCCACAGGTTCCTCAGTCCGAGTGTGCTGGAGCTTATA
C
TCCGACGACACTGTGGAGAGCTATCAGCTGTCCTACCGGCCAGTGCAGGACAGCTCACCTGGGACGGAC
CAA
GCAGCACCTTCTCCCCCCATTATTAAAACCAAAGAGATAAGGAGCTGTGAAGAGGCTGTGCTGATTT
GC
TGGGAGTCTGGGAACCTGAATCCTGTGGACTCGTACACTGTGGAGCTGACCCAGGCTGAAAGTCCAGA
A
GCCTCGGGTGTAACTGAGTCTGTTGTGGGCATCCCGACCTGCGAGTCCGTGGTGCAGCTGCAGCCGGGG
CGG
AGCTACATTATCTATGTGCGAGCCCTCAATATGGGGGGCCCCAGCGTGAGGAGCGAGCCAGCTACAG
TC
CACACCATAGGAAGCTACTTTCGCCTAAACAAGGACACTTGCCATCCCTGGCTGACCATTTCTGAAGA
C
GGACTTACGGCTGTACGAAGTGAAAGGAGAACCCCCGCCAGGGAGCTGTCACCCAGCGACACTCACTTC
ACC
AGGTGTGTTGCTGTCATGGGAAATCTAATTCCAGTCCGAGGGCACCATTACTGGGAGGTGGAGGTGG
AT
GAGCATTTGGACTACAGAGTTGGTGTGGCCTTTGCAGATGTCCGTAAACAGGAGGATCTGGGAGCAAA
T
TGCCTCTCCTGGTGCATGAGGCACACATTTGCATCATCAAGGCATAAGTATGAATTTCTGCACAACAGA
ACA
ACTCCAGATATAAGAATAACAGTTCCACCAAAGAAGATTGGCATTCTATTAGACTATGAACATTCAA
AG
TTGTCATTTTTCAATGTGGACCTTTCTCAGCATCTATATACATTTAGTTGTCAGCTTCACGAATTTGT
G
CATCCCTGTTTTTCTTTGGAAAAGCCTGGGTGTCTAAAGGTACATAATGGCATTTCAATGCCAAAACAT
GTC
ACTTTCTATTAG


Translation (704 aa):
MEEESGEELGLDRSTPKDFHFYHMDLYDSEDRLHLFPEENTRMRKVVQAEMANESRGAGDGKAQRDLQEE
V
DELVHLYGLEDDHELGDEFVDENIPRTGVSEYPPYMMKRRDPAREQRDWRLSGEAAEAEDLGFGGWGSA
G
QCQDLREAYRYTHGRASEEYECYVIPEEEDEEEAADVFCVTCKTPIRAFQKVFDEHKEHEVIPLNEALE
S
AK
DEIHKNMYKLEKQIIEMENFANHLEEVFITVEENFGKQEQNFESHYNEILETLAQKYEEKIQALGEK
K
KEKLEALYGQLVSCGENLDTCKELMETIEEMCHEEKVDFIK
DAVAMADRLGKFLKTKTDVEISAQPEFE
D
QTLDFSDVEQLMGSINTIP
APSAPVINPQVPNSATGSSVRVCWSLYSDDTVESYQLSYRPVQDSSPGTD
Q
A
APSPPIIKTKEIRSCEEAVLICWESGNLNPVDSYTVELTQAESPEASGVTESVVGIPTCESVVQLQPG
R
SYIIYVRALNMGGPSVRSEPATVHTI
GSYFRLNKDTCHPWLTISEDGLTAVRSERRTPARELSPSDTHF
T
RCVAVMGNLIPVRGHHYWEVEVDEHLDYRVGVAFADVRKQEDLGANCLSWCMRHTFASSRHKYEFLHNR
T
TPDIRITVPPKKIGILLDYEHSKLSFFNVDLSQHLYTFSCQLHEFVHPCFSLEKPGCLKVHNGISMPKH
V
TFY




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser