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Report for CCDS56258.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56258.1 Public Homo sapiens 3 NAA80 24 110 108 CCDS HistoryNCBI Gene:24142Re-query CCDS DB by CCDS ID:56258.1Re-query CCDS DB by GeneID:24142See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56258.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000417393.1 ENSP00000391893.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000417393.1Link to Ensembl Protein Viewer:ENSP00000391893.1Re-query CCDS DB by Nucleotide ID:ENST00000417393Re-query CCDS DB by Protein ID:ENSP00000391893
Original member Current member EBI ENST00000443842.1 ENSP00000400559.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000443842.1Link to Ensembl Protein Viewer:ENSP00000400559.1Re-query CCDS DB by Nucleotide ID:ENST00000443842Re-query CCDS DB by Protein ID:ENSP00000400559
Original member Current member EBI ENST00000443094.3 ENSP00000410610.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000443094.3Link to Ensembl Protein Viewer:ENSP00000410610.2Re-query CCDS DB by Nucleotide ID:ENST00000443094Re-query CCDS DB by Protein ID:ENSP00000410610
Original member Current member NCBI NM_001200016.2 NP_001186945.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001200016.2Link to Protein Sequence:NP_001186945.1Re-query CCDS DB by Nucleotide ID:NM_001200016Re-query CCDS DB by Protein ID:NP_001186945Link to BLAST:NP_001186945.1
Original member Current member NCBI NM_001200018.2 NP_001186947.1 Accepted alive Link to Nucleotide Sequence:NM_001200018.2Link to Protein Sequence:NP_001186947.1Re-query CCDS DB by Nucleotide ID:NM_001200018Re-query CCDS DB by Protein ID:NP_001186947Link to BLAST:NP_001186947.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001186945.1 286 Q93015-1 286 100% 0 0
NP_001186947.1 286 Q93015-1 286 100% 0 0

Chromosomal Locations for CCDS 56258.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 50296603 50297463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (861 nt):
ATGGAGCTGATCCTGAGTACCAGCCCAGCTGAGCTGACTCTGGATCCTGCGTGCCAGCCAAAGCTGCCCC
TGGATTCCACATGCCAACCAGAGATGACCTTCAATCCTGGTCCAACTGAGCTTACCCTGGATCCTGAACA
CCAGCCAGAGGAGACCCCAGCTCCTAGCCTGGCTGAGTTGACCCTGGAGCCTGTGCACCGCCGACCCGAG
CTCCTGGATGCTTGTGCTGACCTCATCAATGATCAGTGGCCCCGCAGCCGCACCTCCCGCCTGCACTCCC
TGGGCCAGTCCTCAGATGCCTTCCCCCTCTGCCTGATGCTGCTAAGCCCCCACCCCACACTTGAAGCAGC
ACCCGTTGTGGTGGGCCATGCCCGCCTGTCACGGGTGCTGAACCAGCCCCAGAGCCTCTTAGTGGAGACA
GTGGTGGTGGCCCGGGCCCTGAGGGGCCGTGGCTTTGGCCGCCGCCTCATGGAGGGCCTGGAGGTCTTTG
CTCGGGCCCGGGGCTTCCGCAAGCTGCATCTCACCACCCATGACCAGGTGCACTTCTATACCCACCTGGG
CTACCAGCTGGGTGAGCCTGTGCAGGGCCTGGTCTTCACCAGCAGACGGCTGCCTGCCACCCTGCTTAAT
GCCTTCCCCACAGCCCCCTCTCCCCGGCCACCCAGGAAGGCCCCAAACCTGACTGCCCAAGCTGCCCCAA
GGGGTCCCAAGGGACCTCCATTGCCACCACCCCCTCCCCTACCTGAGTGCCTGACCATCTCACCCCCAGT
TCCATCAGGGCCCCCTTCAAAAAGCCTGCTGGAGACACAATATCAAAATGTGAGGGGGCGCCCCATATTC
TGGATGGAAAAAGACATCTGA

Translation (286 aa):
MELILSTSPAELTLDPACQPKLPLDSTCQPEMTFNPGPTELTLDPEHQPEETPAPSLAELTLEPVHRRPE
LLDACADLINDQWPRSRTSRLHSLGQSSDAFPLCLMLLSPHPTLEAAPVVVGHARLSRVLNQPQSLLVET
VVVARALRGRGFGRRLMEGLEVFARARGFRKLHLTTHDQVHFYTHLGYQLGEPVQGLVFTSRRLPATLLN
AFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKSLLETQYQNVRGRPIF
WMEKDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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