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Report for CCDS61619.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61619.1 Public Homo sapiens 15 DUOXA1 24 110 108 CCDS HistoryNCBI Gene:90527Re-query CCDS DB by CCDS ID:61619.1Re-query CCDS DB by GeneID:90527See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61619.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000558422.5 ENSP00000453836.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000558422.5Link to Ensembl Protein Viewer:ENSP00000453836.1Re-query CCDS DB by Nucleotide ID:ENST00000558422Re-query CCDS DB by Protein ID:ENSP00000453836
Original member Current member EBI ENST00000558996.5 ENSP00000454019.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000558996.5Link to Ensembl Protein Viewer:ENSP00000454019.1Re-query CCDS DB by Nucleotide ID:ENST00000558996Re-query CCDS DB by Protein ID:ENSP00000454019
Original member Current member NCBI NM_001276267.2 NP_001263196.1 Accepted alive Link to Nucleotide Sequence:NM_001276267.2Link to Protein Sequence:NP_001263196.1Re-query CCDS DB by Nucleotide ID:NM_001276267Re-query CCDS DB by Protein ID:NP_001263196Link to BLAST:NP_001263196.1
Original member Current member NCBI NM_001276268.2 NP_001263197.1 Accepted alive Link to Nucleotide Sequence:NM_001276268.2Link to Protein Sequence:NP_001263197.1Re-query CCDS DB by Nucleotide ID:NM_001276268Re-query CCDS DB by Protein ID:NP_001263197Link to BLAST:NP_001263197.1
Original member Current member NCBI NM_001384349.1 NP_001371278.1 Accepted alive Link to Nucleotide Sequence:NM_001384349.1Link to Protein Sequence:NP_001371278.1Re-query CCDS DB by Nucleotide ID:NM_001384349Re-query CCDS DB by Protein ID:NP_001371278Link to BLAST:NP_001371278.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001263196.1 298 Q1HG43-3 298 100% 0 0
NP_001263197.1 298 Q1HG43-3 298 100% 0 0
NP_001371278.1 298 Q1HG43-3 298 100% 0 0

Chromosomal Locations for CCDS 61619.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 45119106 45119365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45120103 45120320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45120592 45120805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45122185 45122242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 45122868 45123014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (897 nt):
ATGGCTACTTTGGGACACACATTCCCCTTCTATGCTGGCCCCAAGCCAACCTTCCCGATGGACACCACTT
TGGCCAGCATCATCATGATCTTTCTGACTGCACTGGCCACGTTCATCGTCATCCTGCCTGGCATTCGGGG
AAAGACGAGGCTGTTCTGGCTGCTTCGGGTGGTGACCAGCTTATTCATCGGGGCTGCAATCCTGGGGACC
CCCGTGCAGCAGCTGAATGAGACCATCAATTACAACGAGGAGTTCACCTGGCGCCTGGGTGAGAACTATG
CTGAGGAGTATGCAAAGGCTCTGGAGAAGGGGCTGCCAGACCCTGTGTTGTACCTAGCTGAGAAGTTCAC
TCCAAGAAGCCCATGTGGCCTATACCGCCAGTACCGCCTGGCGGGACACTACACCTCAGCCATGCTATGG
GTGGCATTCCTCTGCTGGCTGCTGGCCAATGTGATGCTCTCCATGCCTGTGCTGGTATATGGTGGCTACA
TGCTATTGGCCACGGGCATCTTCCAGCTGTTGGCTCTGCTCTTCTTCTCCATGGCCACATCACTCACCTC
ACCCTGTCCCCTGCACCTGGGCGCTTCTGTGCTGCATACTCACCATGGGCCTGCCTTCTGGATCACATTG
ACCACAGGACTGCTGTGTGTGCTGCTGGGCCTGGCTATGGCGGTGGCCCACAGGATGCAGCCTCACAGGC
TGAAGGCTTTCTTCAACCAGAGTGTGGATGAAGACCCCATGCTGGAGTGGAGTCCTGAGGAAGGTGGACT
CCTGAGCCCCCGCTACCGGTCCATGGCTGACAGTCCCAAGTCCCAGGACATTCCCCTGTCAGAGGCTTCC
TCCACCAAGGCATACTGTAAGGAGGCACACCCCAAAGATCCTGATTGTGCTTTATAA

Translation (298 aa):
MATLGHTFPFYAGPKPTFPMDTTLASIIMIFLTALATFIVILPGIRGKTRLFWLLRVVTSLFIGAAILGT
PVQQLNETINYNEEFTWRLGENYAEEYAKALEKGLPDPVLYLAEKFTPRSPCGLYRQYRLAGHYTSAMLW
VAFLCWLLANVMLSMPVLVYGGYMLLATGIFQLLALLFFSMATSLTSPCPLHLGASVLHTHHGPAFWITL
TTGLLCVLLGLAMAVAHRMQPHRLKAFFNQSVDEDPMLEWSPEEGGLLSPRYRSMADSPKSQDIPLSEAS
STKAYCKEAHPKDPDCAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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