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Report for CCDS33378.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33378.1 Public Homo sapiens 2 AAMP 24 110 108 CCDS HistoryNCBI Gene:14Re-query CCDS DB by CCDS ID:33378.1Re-query CCDS DB by GeneID:14See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33378.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000248450.9 ENSP00000248450.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000248450.9Link to Ensembl Protein Viewer:ENSP00000248450.4Re-query CCDS DB by Nucleotide ID:ENST00000248450Re-query CCDS DB by Protein ID:ENSP00000248450
Original member Current member NCBI NM_001087.5 NP_001078.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001087.5Link to Protein Sequence:NP_001078.2Re-query CCDS DB by Nucleotide ID:NM_001087Re-query CCDS DB by Protein ID:NP_001078Link to BLAST:NP_001078.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001078.2 434 Q13685 434 100% 0 0

Chromosomal Locations for CCDS 33378.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 218264533 218264608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218265020 218265174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218265371 218265461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218265579 218265682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218265831 218265946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218266064 218266147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218266443 218266587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218266847 218266986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218267494 218267613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218269382 218269534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218269966 218270086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1305 nt):
ATGGAGTCCGAATCGGAAAGCGGGGCTGCTGCTGACACCCCCCCACTGGAGACCCTAAGCTTCCATGGTG
ATGAAGAGATTATCGAGGTGGTAGAACTTGATCCCGGTCCGCCGGACCCAGATGACCTGGCCCAGGAGAT
GGAAGATGTGGACTTTGAGGAAGAAGAGGAGGAAGAGGGCAACGAAGAGGGCTGGGTTCTAGAACCCCAG
GAAGGGGTGGTCGGCAGCATGGAGGGCCCCGACGATAGCGAGGTCACCTTTGCATTGCACTCAGCATCTG
TGTTTTGTGTGAGCCTGGACCCCAAGACCAATACCTTGGCAGTGACCGGGGGTGAAGATGACAAAGCCTT
CGTATGGCGGCTCAGCGATGGGGAGCTGCTCTTTGAGTGTGCAGGCCATAAAGACTCTGTGACTTGTGCT
GGTTTCAGCCATGACTCCACTCTAGTGGCCACAGGGGACATGAGTGGCCTCTTGAAAGTGTGGCAGGTGG
ACACTAAGGAGGAGGTCTGGTCCTTTGAAGCGGGAGACCTGGAGTGGATGGAGTGGCATCCTCGGGCACC
TGTCCTGTTGGCGGGCACAGCTGACGGCAACACCTGGATGTGGAAAGTCCCGAATGGTGACTGCAAGACC
TTCCAGGGTCCCAACTGCCCAGCCACCTGTGGCCGAGTCCTCCCTGATGGGAAGAGAGCTGTGGTAGGCT
ATGAAGATGGGACCATCAGGATTTGGGACCTGAAGCAGGGAAGCCCTATCCATGTACTGAAAGGGACTGA
GGGTCACCAGGGCCCACTCACCTGTGTTGCTGCCAACCAGGATGGCAGCTTGATCCTAACTGGCTCTGTG
GACTGCCAGGCCAAGCTGGTCAGTGCCACCACCGGCAAGGTGGTGGGTGTTTTTAGACCTGAGACTGTGG
CCTCCCAGCCCAGCCTGGGAGAAGGGGAGGAGAGTGAGTCCAACTCGGTGGAGTCCTTGGGCTTCTGCAG
TGTGATGCCCCTGGCAGCTGTTGGCTACCTGGATGGGACCTTGGCCATCTATGACCTGGCTACGCAGACT
CTTAGGCATCAGTGTCAGCACCAGTCGGGCATCGTGCAGCTGCTGTGGGAGGCAGGCACTGCCGTGGTAT
ATACCTGCAGCCTGGATGGCATCGTGCGCCTCTGGGACGCCCGGACCGGCCGCCTGCTTACTGACTACCG
GGGCCACACGGCTGAGATCCTGGACTTTGCCCTCAGCAAAGATGCCTCCCTGGTGGTGACCACGTCAGGA
GACCACAAAGCGAAAGTATTTTGTGTCCAAAGGCCTGACCGTTAA

Translation (434 aa):
MESESESGAAADTPPLETLSFHGDEEIIEVVELDPGPPDPDDLAQEMEDVDFEEEEEEEGNEEGWVLEPQ
EGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCA
GFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWMEWHPRAPVLLAGTADGNTWMWKVPNGDCKT
FQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVAANQDGSLILTGSV
DCQAKLVSATTGKVVGVFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYDLATQT
LRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEILDFALSKDASLVVTTSG
DHKAKVFCVQRPDR


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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