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Report for CCDS69058.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69058.1 Public Homo sapiens 6 RIPOR2 24 110 108 CCDS HistoryNCBI Gene:9750Re-query CCDS DB by CCDS ID:69058.1Re-query CCDS DB by GeneID:9750See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 69058.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000643898.2 ENSP00000494268.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000643898.2Link to Ensembl Protein Viewer:ENSP00000494268.2Re-query CCDS DB by Nucleotide ID:ENST00000643898Re-query CCDS DB by Protein ID:ENSP00000494268
Original member Current member NCBI NM_001286445.3 NP_001273374.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001286445.3Link to Protein Sequence:NP_001273374.1Re-query CCDS DB by Nucleotide ID:NM_001286445Re-query CCDS DB by Protein ID:NP_001273374Link to BLAST:NP_001273374.1

Chromosomal Locations for CCDS 69058.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 24806373 24806473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24809717 24809807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24818542 24818625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24825226 24825428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24828137 24828295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24830509 24830670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24832256 24832391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24835703 24835871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24839091 24839272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24842862 24843554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24848025 24848154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24849802 24849950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24850597 24850722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24852575 24852618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24860973 24861036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24865301 24865450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24869094 24869147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24870866 24870889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24872881 24872959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24873644 24873799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24875691 24875817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24935838 24935898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3144 nt):
ATGCAGTTTTTTGATGCTGAGGAGCTCCTGGTCGATGAAGAGGATGATGTTTTTGGTGAAGGACTACCGA
CCAGACTCCCGGAAATCATGTTGGTAGGATCCCAGTCTTTTTCGCCTGGAGGGCCCAATGGGATCATTAG
AAGCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAGGTGTAACTCCTTCATTGAAAAT
TCCTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAAAATGCACAATTTAGGCCACAAAAACAACAATC
CCCCCAAAGAGCCTCAGCCTAAAAGGGTGGAAGAAGTCTACAGGGCCTTGAAAAATGGACTTGATGAATA
TCTGGAGGTTCACCAGACGGAGCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAAAAGAAACTCTCGC
CTGGGTGTACTGTATGACCTAGACAAGCAAATTAAAACAATTGAAAGATACATGAGACGCCTGGAGTTTC
ATATAAGTAAGGTAGATGAACTCTATGAAGCTTATTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAA
AATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGGGAGAGTCTGACAGAGATCAATCGG
AGCTTCAAGGAGTACACAGAGAATATGTGCACCATTGAAGTGGAGCTAGAGAATCTGCTGGGAGAATTCT
CCATCAAGATGAAAGGTCTGGCTGGCTTTGCACGCCTCTGTCCTGGAGATCAATATGAAATTTTCATGAA
GTATGGCCGGCAGCGGTGGAAACTGAAAGGCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGAA
GAAACAGTTTTTCTGCCCCTGATAGTTGGGTTCATCTCCATCAAGGTCACGGAGCTCAAAGGGCTAGCAA
CTCACATCCTGGTAGGTAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGCCCGACCTCAGGTAGTGGC
TGTCGACATCAATGACCTTGGTACCATCAAACTGAACCTGGAAATCACCTGGTATCCATTTGACGTGGAG
GACATGACCGCATCCTCAGGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCATGTACAGCC
AGGGTACCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTTTTCAAATCTACCTGATGACATCTTTGA
AAATGGAAAGGCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTCAGTGACCTGCCCAACGGGGACTGC
GCCCTCACCTCCCACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATTACCATCACCCCTGCGG
AGTTTAACCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGATGACACCAGCTCAGCATCTTCCAGGAA
CTCCCTGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAACCT
GCCTCGGCCCCATCTGAGGCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGA
ATGATGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGACAC
TTCGGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCCACAGAC
AGGCTGCTCTCTGAGGGTTCTGTTGGTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATGGAAGCTTAG
AGGATGCTTTTAATGGGCTTTTACTTGCATTAGAACCACATAAAGAGCAGTATAAAGAGTTTCAGGATCT
GAACCAAGAAGTCATGAATTTGGATGATATTCTAAAATGCAAGCCAGCAGTAAGCCGCAGCAGGTCTTCC
AGTTTAAGTCTCACAGTTGAAAGTGCTTTAGAAAGCTTTGATTTCCTGAACACCTCTGATTTTGACGAGG
AGGAGGATGGTGATGAGGTTTGTAATGTTGGCGGAGGTGCTGACTCAGTATTTTCAGACACTGAGACTGA
GAAACACAGTTACAGGTCGGTTCACCCAGAAGCCAGGGGGCATCTCAGTGAAGCGCTCACTGAAGACACA
GGAGTTGGGACCAGTGTGGCAGGAAGTCCTCTCCCACTGACCACAGGCAACGAGAGCCTGGACATCACCA
TCGTCAGGCACCTCCAGTACTGCACCCAACTCGTGCAGCAAATTGTTTTCTCAAGCAAAACCCCATTTGT
GGCAAGAAGTCTCTTAGAGAAGCTTTCTAGGCAGATCCAAGTGATGGAGAAACTCGCAGCTGTCAGTGAT
GAGAACATAGGAAATATCAGTTCTGTTGTGGAAGCCATACCAGAATTTCACAAAAAGCTGTCTTTGCTGT
CATTCTGGACCAAGTGCTGCAGCCCTGTTGGTGTCTACCACAGCCCAGCGGACAGAGTGATGAAGCAGCT
GGAGGCCAGCTTTGCCAGAACTGTCAACAAAGAATATCCAGGACTTGCAGACCCAGTGTTTCGAACCCTG
GTGTCCCAAATTCTGGACCGGGCTGAGCCTCTGCTTTCCTCCAGCCTGTCCTCGGAAGTCGTCACTGTTT
TCCAGTATTACAGTTACTTCACCAGCCACGGCGTCAGTGACCTGGAGAGTTACCTGAGCCAGCTGGCCAG
GCAAGTTTCCATGGTTCAGACTCTGCAATCACTAAGAGATGAAAAACTGCTACAAACCATGAGTGACCTT
GCTCCCAGCAACCTCCTGGCCCAGCAGGAAGTACTCAGGACTCTGGCTCTGCTATTAACCAGAGAGGACA
ACGAAGTTAGTGAGGCTGTGACGCTTTACTTGGCAGCAGCCTCCAAAAATCAGCATTTCAGGGAAAAGGC
CTTGCTCTATTACTGTGAAGCACTAACAAAGACAAACCTCCAGCTCCAGAAAGCAGCTTGCCTGGCTCTG
AAAATCCTTGAGGCTACTGAAAGCATTAAAATGCTGGTGACATTGTGTCAATCTGATACTGAAGAAATCA
GAAATGTGGCCTCAGAAACCCTCTTGTCTCTGGGAGAAGATGGGCGGCTGGCATATGAACAATTGGACAA
ATTTCCTCGAGACTGTGTTAAAGTCGGAGGTCGTCATGGAACTGAAGTTGCCACAGCCTTTTAA

Translation (1047 aa):
MQFFDAEELLVDEEDDVFGEGLPTRLPEIMLVGSQSFSPGGPNGIIRSQSFAGFSGLQERRSRCNSFIEN
SSALKKPQAKLKKMHNLGHKNNNPPKEPQPKRVEEVYRALKNGLDEYLEVHQTELDKLTAQLKDMKRNSR
LGVLYDLDKQIKTIERYMRRLEFHISKVDELYEAYCIQRRLQDGASKMKQAFATSPASKAARESLTEINR
SFKEYTENMCTIEVELENLLGEFSIKMKGLAGFARLCPGDQYEIFMKYGRQRWKLKGKIEVNGKQSWDGE
ETVFLPLIVGFISIKVTELKGLATHILVGSVTCETKELFAARPQVVAVDINDLGTIKLNLEITWYPFDVE
DMTASSGAGNKAAALQRRMSMYSQGTPETPTFKDHSFFSNLPDDIFENGKAAEEKMPLSLSFSDLPNGDC
ALTSHSTGSPSNSTNPEITITPAEFNLSSLASQNEGMDDTSSASSRNSLGEGQEPKSHLKEEDPEEPRKP
ASAPSEACRRQSSGAGAEHLFLENDVAEALLQESEEASELKPVELDTSEGNITKQLVKRLTSAEVPMATD
RLLSEGSVGGESEGCRSFLDGSLEDAFNGLLLALEPHKEQYKEFQDLNQEVMNLDDILKCKPAVSRSRSS
SLSLTVESALESFDFLNTSDFDEEEDGDEVCNVGGGADSVFSDTETEKHSYRSVHPEARGHLSEALTEDT
GVGTSVAGSPLPLTTGNESLDITIVRHLQYCTQLVQQIVFSSKTPFVARSLLEKLSRQIQVMEKLAAVSD
ENIGNISSVVEAIPEFHKKLSLLSFWTKCCSPVGVYHSPADRVMKQLEASFARTVNKEYPGLADPVFRTL
VSQILDRAEPLLSSSLSSEVVTVFQYYSYFTSHGVSDLESYLSQLARQVSMVQTLQSLRDEKLLQTMSDL
APSNLLAQQEVLRTLALLLTREDNEVSEAVTLYLAAASKNQHFREKALLYYCEALTKTNLQLQKAACLAL
KILEATESIKMLVTLCQSDTEEIRNVASETLLSLGEDGRLAYEQLDKFPRDCVKVGGRHGTEVATAF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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