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Report for CCDS2441.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2441.1 Public Homo sapiens 2 GMPPA 24 110 108 CCDS HistoryNCBI Gene:29926Re-query CCDS DB by CCDS ID:2441.1Re-query CCDS DB by GeneID:29926See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2441.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313597.10 ENSP00000315925.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000313597.10Link to Ensembl Protein Viewer:ENSP00000315925.6Re-query CCDS DB by Nucleotide ID:ENST00000313597Re-query CCDS DB by Protein ID:ENSP00000315925
Original member Current member EBI ENST00000341142.8 ENSP00000340760.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000341142.8Link to Ensembl Protein Viewer:ENSP00000340760.3Re-query CCDS DB by Nucleotide ID:ENST00000341142Re-query CCDS DB by Protein ID:ENSP00000340760
Original member Current member EBI ENST00000358215.8 ENSP00000350949.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000358215.8Link to Ensembl Protein Viewer:ENSP00000350949.3Re-query CCDS DB by Nucleotide ID:ENST00000358215Re-query CCDS DB by Protein ID:ENSP00000350949
Original member Current member EBI ENST00000373908.5 ENSP00000363016.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373908.5Link to Ensembl Protein Viewer:ENSP00000363016.1Re-query CCDS DB by Nucleotide ID:ENST00000373908Re-query CCDS DB by Protein ID:ENSP00000363016
Original member Current member EBI ENST00000622191.2 ENSP00000478700.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000622191.2Link to Ensembl Protein Viewer:ENSP00000478700.2Re-query CCDS DB by Nucleotide ID:ENST00000622191Re-query CCDS DB by Protein ID:ENSP00000478700
Original member Current member EBI ENST00000683946.1 ENSP00000506941.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683946.1Link to Ensembl Protein Viewer:ENSP00000506941.1Re-query CCDS DB by Nucleotide ID:ENST00000683946Re-query CCDS DB by Protein ID:ENSP00000506941
Original member Current member NCBI NM_001374294.1 NP_001361223.1 Accepted alive Link to Nucleotide Sequence:NM_001374294.1Link to Protein Sequence:NP_001361223.1Re-query CCDS DB by Nucleotide ID:NM_001374294Re-query CCDS DB by Protein ID:NP_001361223Link to BLAST:NP_001361223.1
Original member Current member NCBI NM_001374295.1 NP_001361224.1 Accepted alive Link to Nucleotide Sequence:NM_001374295.1Link to Protein Sequence:NP_001361224.1Re-query CCDS DB by Nucleotide ID:NM_001374295Re-query CCDS DB by Protein ID:NP_001361224Link to BLAST:NP_001361224.1
Original member Current member NCBI NM_013335.4 NP_037467.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013335.4Link to Protein Sequence:NP_037467.2Re-query CCDS DB by Nucleotide ID:NM_013335Re-query CCDS DB by Protein ID:NP_037467Link to BLAST:NP_037467.2
Original member Current member NCBI NM_205847.3 NP_995319.1 Accepted alive Link to Nucleotide Sequence:NM_205847.3Link to Protein Sequence:NP_995319.1Re-query CCDS DB by Nucleotide ID:NM_205847Re-query CCDS DB by Protein ID:NP_995319Link to BLAST:NP_995319.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001361223.1 420 Q96IJ6-1 420 100% 0 0
NP_001361224.1 420 Q96IJ6-1 420 100% 0 0
NP_037467.2 420 Q96IJ6-1 420 100% 0 0
NP_995319.1 420 Q96IJ6-1 420 100% 0 0

Chromosomal Locations for CCDS 2441.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 219499976 219500015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219500121 219500218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219501476 219501579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219501851 219502037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219502382 219502441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219504083 219504213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219505228 219505362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219505458 219505555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219505715 219505761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219505980 219506072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219506254 219506422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219506698 219506798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1263 nt):
ATGCTCAAAGCGGTGATCCTGATTGGAGGCCCTCAAAAGGGAACTCGCTTCAGACCTTTGTCTTTTGAGG
TGCCCAAACCATTGTTTCCTGTGGCAGGGGTCCCTATGATCCAACACCATATTGAAGCCTGTGCCCAGGT
CCCTGGAATGCAGGAGATTCTGCTCATTGGCTTCTACCAACCTGATGAGCCCCTCACCCAGTTCCTAGAA
GCCGCCCAGCAGGAGTTTAACCTTCCAGTCAGGTACCTGCAGGAATTTGCCCCCCTAGGCACAGGGGGTG
GTCTTTACCATTTTCGAGACCAGATCCTGGCTGGGAGCCCCGAGGCATTCTTCGTGCTCAATGCTGATGT
CTGCTCCGACTTCCCCTTGAGTGCTATGTTGGAAGCCCACCGACGCCAGCGTCACCCTTTCTTACTCCTT
GGCACTACGGCTAACAGGACGCAATCCCTCAACTACGGCTGCATCGTTGAGAATCCACAGACACACGAGG
TATTGCACTATGTGGAGAAACCCAGCACATTTATCAGTGACATCATCAACTGCGGCATCTACCTCTTTTC
TCCTGAAGCCTTGAAGCCTCTTCGGGATGTCTTCCAGCGTAATCAGCAGGATGGGCAATTGGAGGACTCA
CCAGGCTTGTGGCCAGGGGCAGGTACCATCCGCCTAGAGCAGGATGTGTTTTCAGCCCTGGCAGGGCAGG
GCCAGATATACGTGCATCTCACTGATGGTATCTGGAGTCAGATCAAGTCCGCAGGTTCAGCCCTCTACGC
CTCCCGCCTCTACCTGAGCCGATACCAGGACACTCACCCAGAACGGCTGGCCAAGCACACCCCAGGGGGC
CCATGGATCCGAGGGAATGTGTACATCCACCCGACCGCCAAGGTGGCCCCCTCGGCTGTGCTGGGCCCCA
ACGTCTCCATCGGGAAGGGGGTGACCGTGGGTGAGGGTGTGCGGCTCCGGGAGAGCATCGTCCTCCATGG
AGCCACTTTGCAGGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTGGGGGAGCACCGTGGGACGCTGG
GCCCGCGTGGAGGGTACCCCCAGTGACCCTAACCCCAACGATCCCCGAGCCCGCATGGACAGTGAGAGCC
TCTTCAAGGACGGGAAGCTGCTGCCTGCTATCACCATCCTGGGCTGCCGAGTCCGGATCCCTGCCGAGGT
GCTCATCCTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTC
TGA

Translation (420 aa):
MLKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEPLTQFLE
AAQQEFNLPVRYLQEFAPLGTGGGLYHFRDQILAGSPEAFFVLNADVCSDFPLSAMLEAHRRQRHPFLLL
GTTANRTQSLNYGCIVENPQTHEVLHYVEKPSTFISDIINCGIYLFSPEALKPLRDVFQRNQQDGQLEDS
PGLWPGAGTIRLEQDVFSALAGQGQIYVHLTDGIWSQIKSAGSALYASRLYLSRYQDTHPERLAKHTPGG
PWIRGNVYIHPTAKVAPSAVLGPNVSIGKGVTVGEGVRLRESIVLHGATLQEHTCVLHSIVGWGSTVGRW
ARVEGTPSDPNPNDPRARMDSESLFKDGKLLPAITILGCRVRIPAEVLILNSIVLPHKELSRSFTNQIIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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