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Report for CCDS32120.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32120.2 Public Homo sapiens 14 LIN52 24 110 108 CCDS HistoryNCBI Gene:91750Re-query CCDS DB by CCDS ID:32120.2Re-query CCDS DB by GeneID:91750See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 32120.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000555028.7 ENSP00000451812.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000555028.7Link to Ensembl Protein Viewer:ENSP00000451812.2Re-query CCDS DB by Nucleotide ID:ENST00000555028Re-query CCDS DB by Protein ID:ENSP00000451812
Original member Current member NCBI NM_001024674.3 NP_001019845.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001024674.3Link to Protein Sequence:NP_001019845.2Re-query CCDS DB by Nucleotide ID:NM_001024674Re-query CCDS DB by Protein ID:NP_001019845Link to BLAST:NP_001019845.2

Chromosomal Locations for CCDS 32120.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 74084975 74084993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74091232 74091306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74095948 74095985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74097794 74097860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74101155 74101238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74198922 74198977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (339 nt):
ATGGCGTCTCCCACAGACGGGACAGATCTGGAAGCATCTTTGCTAAGTTTTGAAAAACTTGACCGTGCCT
CACCAGATCTTTGGCCAGAACAATTACCAGGTGTTGCTGAATTTGCAGCTTCCTTCAAAAGTCCTATTAC
TAGTTCTCCACCCAAATGGATGGCTGAGATAGAACGTGATGACATCGACATGTTGAAAGAACTGGGGAGT
CTCACCACGGCTAATTTGATGGAGAAGGTTCGAGGCCTACAGAACCTAGCCTATCAGCTGGGGCTGGATG
AGTCCAGAGAGATGACACGGGGGAAATTCCTCAATATTCTAGAGAAGCCCAAGAAGTAG

Translation (112 aa):
MASPTDGTDLEASLLSFEKLDRASPDLWPEQLPGVAEFAASFKSPITSSPPKWMAEIERDDIDMLKELGS
LTTANLMEKVRGLQNLAYQLGLDESREMTRGKFLNILEKPKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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