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Report for CCDS13735.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13735.1 Public Homo sapiens 21 C21orf58 24 110 108 CCDS HistoryNCBI Gene:54058Re-query CCDS DB by CCDS ID:13735.1Re-query CCDS DB by GeneID:54058See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13735.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000291691.12 ENSP00000291691.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000291691.12Link to Ensembl Protein Viewer:ENSP00000291691.8Re-query CCDS DB by Nucleotide ID:ENST00000291691Re-query CCDS DB by Protein ID:ENSP00000291691
Original member Current member NCBI NM_058180.5 NP_478060.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_058180.5Link to Protein Sequence:NP_478060.2Re-query CCDS DB by Nucleotide ID:NM_058180Re-query CCDS DB by Protein ID:NP_478060Link to BLAST:NP_478060.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_478060.2 322 P58505-1 322 100% 0 0

Chromosomal Locations for CCDS 13735.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 46301999 46302154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46302485 46302576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46311456 46311567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46314716 46314880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46315474 46315547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46317208 46317268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46318012 46318220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46322639 46322738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (969 nt):
ATGGCGCGATCTCGGCTCCCTGCAACCTCCCTCAGGAAGCCGTGGAAGCTCGACCGCCAGAAACTTCCTT
CTCCTGACTCAGGCCACAGTCTTCTGTGTGGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACAC
CGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAGTAACAGAACCAGGGAGGGAGGTGGGCTGTGG
CCTCCCCTGCCCCTACAGTCGTCTCCTGCAGCTCCCACCATGCTGGACTCATCAGCAGCAGAGCAAGTGA
CCCGACTGACGCTGAAGCTCTTGGGACAGAAGCTGGAGCAAGAACGGCAGAACGTGGAAGGGGGACCTGA
GGGCCTCCACCTCGAGCCAGGAAATGAGGACCGGCCGGACGATGCCCTGCAGACTGCTCTGAAGAGAAGG
AGGGACCTTCTGCAGAGACTCCGGGAACAACACCTCCTGGACGAGCTCTCTCGGGCCCAGGCCTGGAGCG
GGCCAAGCAGAGGAGCCCTCGGGTCAGCCCTGCCCCCAGAGCTGCCCCCCACGGGCATCCTACCCACTGC
CTCCCCATCCCCGCTGGCCCCAGACCCGCCAAGGATCATCCTGCCTACGGTCCCCCAGCCTCCTGCCACC
ATCATTCAGCAGCTCCCTCAGCAGCCACTCATAGCACAGATTCCTCCTCCCCAGGCCTTCCCTACTCAAC
GGTCAGGAAGTATTAAGGAAGACATGGTGGAGCTGCTGCTGCTGCAGAACGCACAGGTGCACCAGTTGGT
CCTGCAGAACTGGATGCTCAAGGCCCTGCCCCCAGCCCTGCAGGACCCGCCACATGTGCCCCCGAGGGTC
CCACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGCACCACCACCACCACCACCACCATGCTGTGTGGCCAC
CTGGGGCTGCCACTGTCCTCCAGCCCGCCCCCAGCCTGTGGACGCCTGGCCCACCCTGA

Translation (322 aa):
MARSRLPATSLRKPWKLDRQKLPSPDSGHSLLCGWSPGGKARPAGNTGAWAPAEQFFPASNRTREGGGLW
PPLPLQSSPAAPTMLDSSAAEQVTRLTLKLLGQKLEQERQNVEGGPEGLHLEPGNEDRPDDALQTALKRR
RDLLQRLREQHLLDELSRAQAWSGPSRGALGSALPPELPPTGILPTASPSPLAPDPPRIILPTVPQPPAT
IIQQLPQQPLIAQIPPPQAFPTQRSGSIKEDMVELLLLQNAQVHQLVLQNWMLKALPPALQDPPHVPPRV
PRAARPRLPAVHHHHHHHHAVWPPGAATVLQPAPSLWTPGPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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