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Report for CCDS7629.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
7629.1 |
Public |
Homo sapiens |
10 |
PLEKHA1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:59338](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:7629.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:59338](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 10 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 7629.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000368990.8 |
ENSP00000357986.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000368990.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000357986.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000368990](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000357986](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000392799.7 |
ENSP00000376547.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000392799.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000376547.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000392799](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000376547](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000433307.2 |
ENSP00000394416.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000433307.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000394416.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000433307](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000394416](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001001974.4 |
NP_001001974.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001001974.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001001974.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001001974](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001001974](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001001974.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001377230.1 |
NP_001364159.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001377230.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001364159.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001377230](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001364159](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001364159.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001377231.1 |
NP_001364160.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001377231.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001364160.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001377231](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001364160](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001364160.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001377232.1 |
NP_001364161.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001377232.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001364161.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001377232](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001364161](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001364161.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001377234.1 |
NP_001364163.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001377234.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001364163.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001377234](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001364163](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001364163.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001377235.1 |
NP_001364164.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001377235.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001364164.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001377235](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001364164](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001364164.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_021622.5 |
NP_067635.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_021622.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_067635.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_021622](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_067635](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_067635.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 7629.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1215 nt): ATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTGAAGAAAATGAAAACAGTGGGA AATTTCTTCGAAGGTACTTCATACTGGATACCAGAGAAGATAGTTTCGTGTGGTACATGGATAATCCACA GAACCTACCTTCTGGATCATCACGTGTTGGAGCCATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCT ACTAAGCTAAGGCCAAAGGCGGAGTTCTGTTTTGTTATGAATGCAGGAATGAGGAAGTACTTCCTACAAG CCAATGATCAGCAGGACCTAGTGGAATGGGTAAATGTGTTAAACAAAGCTATAAAAATTACAGTACCAAA GCAGTCAGACTCACAGCCTAATTCTGATAACCTAAGTCGCCATGGTGAATGTGGGAAAAAGCAAGTGTCT TACAGAACTGATATTGTTGGTGGCGTACCCATCATTACTCCCACTCAGAAAGAAGAAGTAAATGAATGTG GTGAAAGTATTGACAGAAATAATCTGAAACGGTCACAAAGCCATCTTCCTTACTTTACTCCTAAACCACC TCAAGATAGTGCGGTTATCAAAGCTGGATATTGTGTAAAACAAGGAGCAGTGATGAAAAACTGGAAGAGA AGATATTTTCAATTGGATGAAAACACAATAGGCTACTTCAAATCTGAACTGGAAAAGGAACCTCTTCGTG TAATACCACTTAAAGAGGTTCATAAAGTCCAGGAATGTAAGCAAAGCGACATAATGATGAGGGACAACCT CTTTGAAATTGTAACAACGTCTCGAACTTTCTATGTGCAGGCTGATAGCCCTGAAGAGATGCACAGTTGG ATTAAAGCAGTCTCTGGCGCCATTGTAGCACAGCGGGGTCCCGGCAGATCTGCGTCTTCTGAGCATCCCC CCGGTCCTTCAGAATCCAAACACGCTTTCCGTCCTACCAACGCAGCCACCGCCACCTCACATTCCACAGC CTCTCGCAGCAACTCTTTGGTCTCAACCTTTACCATGGAGAAGCGAGGATTTTACGAGTCTCTTGCCAAG GTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCCAAAGTGACTGAACAAG CTCTGTTAAGACCTCAAAGTAAAAATGGCCCTCAGGAAAAAGATTGTGACCTAGTAGACTTGGACGATGC GAGCCTTCCGGTCAGTGACGTGTGA
Translation (404 aa): MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIKLTYISKVSDA TKLRPKAEFCFVMNAGMRKYFLQANDQQDLVEWVNVLNKAIKITVPKQSDSQPNSDNLSRHGECGKKQVS YRTDIVGGVPIITPTQKEEVNECGESIDRNNLKRSQSHLPYFTPKPPQDSAVIKAGYCVKQGAVMKNWKR RYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSW IKAVSGAIVAQRGPGRSASSEHPPGPSESKHAFRPTNAATATSHSTASRSNSLVSTFTMEKRGFYESLAK VKPGNFKVQTVSPREPASKVTEQALLRPQSKNGPQEKDCDLVDLDDASLPVSDV
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