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Report for CCDS744.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
744.1 Public Homo sapiens 1 DR1 24 110 108 CCDS HistoryNCBI Gene:1810Re-query CCDS DB by CCDS ID:744.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 744.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370267.1 ENSP00000359290.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000370267.1Link to Ensembl Protein Viewer:ENSP00000359290.1Re-query CCDS DB by Nucleotide ID:ENST00000370267Re-query CCDS DB by Protein ID:ENSP00000359290
Original member Current member EBI ENST00000370272.9 ENSP00000359295.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370272.9Link to Ensembl Protein Viewer:ENSP00000359295.3Re-query CCDS DB by Nucleotide ID:ENST00000370272Re-query CCDS DB by Protein ID:ENSP00000359295
Original member Current member NCBI NM_001938.3 NP_001929.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001938.3Link to Protein Sequence:NP_001929.1Re-query CCDS DB by Nucleotide ID:NM_001938Re-query CCDS DB by Protein ID:NP_001929Link to BLAST:NP_001929.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001929.1 176 Q01658 176 100% 0 0

Chromosomal Locations for CCDS 744.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 93346646 93346865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93353908 93354071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93360493 93360639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGGCTTCCTCGTCTGGCAACGATGATGATCTCACTATCCCCAGAGCTGCTATCAATAAAATGATCAAAG
AGACTCTTCCTAATGTCCGGGTGGCCAACGATGCTCGAGAGCTGGTGGTGAACTGCTGCACTGAATTCAT
TCACCTTATATCTTCTGAAGCCAATGAGATTTGTAACAAATCGGAAAAGAAGACCATCTCACCAGAGCAT
GTCATACAAGCACTAGAAAGTTTGGGATTTGGCTCTTACATCAGTGAAGTAAAAGAAGTCTTGCAAGAGT
GTAAAACAGTAGCATTAAAAAGAAGAAAGGCCAGTTCTCGTTTGGAAAACCTTGGCATTCCTGAAGAAGA
GTTATTGAGACAGCAACAAGAATTATTTGCAAAAGCTAGACAGCAACAAGCAGAATTGGCCCAACAGGAA
TGGCTTCAAATGCAGCAAGCTGCCCAACAAGCCCAGCTTGCTGCTGCCTCAGCCAGTGCATCTAATCAGG
CGGGATCTTCTCAGGATGAAGAAGATGATGATGATATCTGA

Translation (176 aa):
MASSSGNDDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEH
VIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQE
WLQMQQAAQQAQLAAASASASNQAGSSQDEEDDDDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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