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Report for CCDS77295.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77295.1 Public Homo sapiens 19 SAMD4B 24 110 108 CCDS HistoryNCBI Gene:55095Re-query CCDS DB by CCDS ID:77295.1Re-query CCDS DB by GeneID:55095See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77295.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000598913.5 ENSP00000470237.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000598913.5Link to Ensembl Protein Viewer:ENSP00000470237.1Re-query CCDS DB by Nucleotide ID:ENST00000598913Re-query CCDS DB by Protein ID:ENSP00000470237
Original member Current member NCBI NM_001303614.2 NP_001290543.1 Accepted alive Link to Nucleotide Sequence:NM_001303614.2Link to Protein Sequence:NP_001290543.1Re-query CCDS DB by Nucleotide ID:NM_001303614Re-query CCDS DB by Protein ID:NP_001290543Link to BLAST:NP_001290543.1
Original member Current member NCBI NM_001384580.1 NP_001371509.1 Accepted alive Link to Nucleotide Sequence:NM_001384580.1Link to Protein Sequence:NP_001371509.1Re-query CCDS DB by Nucleotide ID:NM_001384580Re-query CCDS DB by Protein ID:NP_001371509Link to BLAST:NP_001371509.1
Original member Current member NCBI NM_001384581.1 NP_001371510.1 Accepted alive Link to Nucleotide Sequence:NM_001384581.1Link to Protein Sequence:NP_001371510.1Re-query CCDS DB by Nucleotide ID:NM_001384581Re-query CCDS DB by Protein ID:NP_001371510Link to BLAST:NP_001371510.1
Original member Current member NCBI NM_001384582.1 NP_001371511.1 Accepted alive Link to Nucleotide Sequence:NM_001384582.1Link to Protein Sequence:NP_001371511.1Re-query CCDS DB by Nucleotide ID:NM_001384582Re-query CCDS DB by Protein ID:NP_001371511Link to BLAST:NP_001371511.1
Original member Current member NCBI NM_001384583.1 NP_001371512.1 Accepted alive Link to Nucleotide Sequence:NM_001384583.1Link to Protein Sequence:NP_001371512.1Re-query CCDS DB by Nucleotide ID:NM_001384583Re-query CCDS DB by Protein ID:NP_001371512Link to BLAST:NP_001371512.1
Original member Current member NCBI NM_001384584.1 NP_001371513.1 Accepted alive Link to Nucleotide Sequence:NM_001384584.1Link to Protein Sequence:NP_001371513.1Re-query CCDS DB by Nucleotide ID:NM_001384584Re-query CCDS DB by Protein ID:NP_001371513Link to BLAST:NP_001371513.1

Chromosomal Locations for CCDS 77295.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 39356894 39357089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39369655 39370125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39375650 39375889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39376437 39376546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39376705 39376791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39377485 39377824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39378504 39378589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39379966 39380084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39380587 39380785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39380990 39381113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39383208 39383291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39383708 39383730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2079 nt):
ATGATGTTCCGAGACCAGGTGGGCATCCTCGCTGGCTGGTTCAAAGGCTGGAATGAGTGTGAGCAGACAG
TGGCCCTCCTGTCACTTCTGAAACGGGTCACCCGTACCCAGGCCCGCTTCCTGCAGCTCTGCCTGGAGCA
CTCACTGGCGGACTGCAATGACATCCACCTGCTGGAGTCGGAGGCCAACAGTGCTGCCATCGTCAGCCAG
TGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTCCCTCCTGCTGTCCCACCTTCCCCTGCTTCAGCCAGGCA
ACACAGAGGCCAAGTCGGAGTACATGAGGCTACTGCAGAAAGTGCTGGCCTACTCAATCGAGAGCAATGC
TTTCATCGAGGAGAGTCGCCAGCTGCTTTCCTATGCCCTCATCCACCCAGCCACCACACTGGAGGACCGC
AACGCACTGGCCCTCTGGCTGAGCCACCTGGAAGAGCGGTTGGCTAGTGGCTTCCGCTCCCGGCCAGAGC
CCTCCTACCATTCACGTCAAGGCTCAGATGAGTGGGGGGGCCCTGCAGAGCTAGGCCCTGGGGAGGCAGG
GCCAGGCTGGCAGGACAAGCCACCCCGGGAAAATGGACACGTGCCCTTCCACCCATCCAGCTCAGTGCCG
CCAGCCATCAACAGTATTGGGAGCAATGCAAACACAGGTCTCCCCTGCCAAATCCACCCTAGCCCACTGA
AGCGCTCCATGTCACTCATCCCTACAAGCCCCCAGGTCCCTGGTGAGTGGCCGAGTCCAGAGGAGCTTGG
GGCCCGGGCTGCTTTTACCACGCCCGATCACGCACCTCTCTCGCCCCAGAGCAGCGTGGCCTCCTCTGGC
AGTGAGCAGACAGAGGAGCAGGGCTCCAGCCGGAACACCTTCCAGGAGGATGGCAGTGGCATGAAAGATG
TGCCCTCATGGCTCAAGAGCCTCCGTTTGCACAAGTATGCAGCCCTCTTCTCACAGATGAGCTACGAGGA
GATGATGACACTGACTGAGCAGCACCTGGAGTCTCAGAACGTCACCAAAGGTGCCCGCCACAAGATAGCC
CTGAGCATCCAGAAGCTGCGTGAGAGACAGAGCGTCCTCAAGTCCCTAGAGAAGGATGTGCTGGAAGGCG
GGAACCTACGAAACGCTCTGCAGGAGCTGCAGCAGATCATCATCACTCCCATCAAGGCCTACAGTGTCCT
CCAGGCCACCGTGGCTGCCGCCACCACCACCCCTACTGCCAAGGATGGGGCCCCGGGGGAACCACCGCTG
CCAGGTGCTGAGCCTCCCCTAGCCCACCCCGGCACAGACAAAGGCACCGAGGCCAAGGACCCTCCAGCTG
TGGAGAACTACCCACCTCCACCAGCTCCAGCTCCCACTGATGGCAGTGAGCCTGCCCCGGCTCCCGTCGC
CGACGGAGACATCCCCAGCCAGTTTACACGGGTGATGGGCAAAGTGTGCACCCAACTGCTGGTGTCCCGA
CCAGACGAGGAGAACATCACCAGTTACCTCCAGCTCATCGAAAAGTGCCTGACTCATGAGGCTTTCACGG
AGACGCAGAAGAAACGGCTGCTATCCTGGAAACAGCAAGTGCTGAAGCTCCTCCGGACATTCCCGCGCAA
AGCCGCACTAGAGATGCAGAACTACCGGCAGCAGAAAGGCTGGGCATTCGGCTCCAACTCGCTCCCCATA
GCTGGCTCTGTGGGGATGGGAGTGGCCCGGCGTACCCAGCGGCAGTTCCCAATGCCTCCCCGGGCCCTCC
CACCCGGCCGGATGGGCCTCCTGAGCCCCTCGGGCATTGGGGGTGTCTCCCCTCGACATGCCCTCACCAG
CCCCAGCCTTGGAGGCCAGGGCCGACAGAACCTGTGGTTTGCCAACCCTGGAGGCAGCAACAGCATGCCC
AGTCAGAGCCGCAGCTCTGTGCAGCGCACCCACTCGCTCCCGGTCCACTCGTCACCCCAGGCCATTCTCA
TGTTCCCTCCAGACTGCCCGGTTCCTGGGCCTGACCTGGAGATCAATCCCACTCTGGAGTCTCTGTGTCT
GAGCATGACAGAACACGCCTTGGGTGGCCCGTCGAGGGATCTCTGCTGA

Translation (692 aa):
MMFRDQVGILAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCNDIHLLESEANSAAIVSQ
WQQESKEKVVSLLLSHLPLLQPGNTEAKSEYMRLLQKVLAYSIESNAFIEESRQLLSYALIHPATTLEDR
NALALWLSHLEERLASGFRSRPEPSYHSRQGSDEWGGPAELGPGEAGPGWQDKPPRENGHVPFHPSSSVP
PAINSIGSNANTGLPCQIHPSPLKRSMSLIPTSPQVPGEWPSPEELGARAAFTTPDHAPLSPQSSVASSG
SEQTEEQGSSRNTFQEDGSGMKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHLESQNVTKGARHKIA
LSIQKLRERQSVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPL
PGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAPVADGDIPSQFTRVMGKVCTQLLVSR
PDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRTFPRKAALEMQNYRQQKGWAFGSNSLPI
AGSVGMGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGVSPRHALTSPSLGGQGRQNLWFANPGGSNSMP
SQSRSSVQRTHSLPVHSSPQAILMFPPDCPVPGPDLEINPTLESLCLSMTEHALGGPSRDLC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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