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Report for CCDS77295.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
77295.1 |
Public |
Homo sapiens |
19 |
SAMD4B |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:55095](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:77295.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:55095](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 19 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 77295.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000598913.5 |
ENSP00000470237.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000598913.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000470237.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000598913](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000470237](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001303614.2 |
NP_001290543.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001303614.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001290543.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001303614](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001290543](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001290543.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384580.1 |
NP_001371509.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384580.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371509.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384580](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371509](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371509.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384581.1 |
NP_001371510.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384581.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371510.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384581](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371510](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371510.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384582.1 |
NP_001371511.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384582.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371511.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384582](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371511](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371511.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384583.1 |
NP_001371512.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384583.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371512.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384583](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371512](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371512.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384584.1 |
NP_001371513.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384584.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371513.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384584](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371513](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371513.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 77295.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2079 nt): ATGATGTTCCGAGACCAGGTGGGCATCCTCGCTGGCTGGTTCAAAGGCTGGAATGAGTGTGAGCAGACAG TGGCCCTCCTGTCACTTCTGAAACGGGTCACCCGTACCCAGGCCCGCTTCCTGCAGCTCTGCCTGGAGCA CTCACTGGCGGACTGCAATGACATCCACCTGCTGGAGTCGGAGGCCAACAGTGCTGCCATCGTCAGCCAG TGGCAGCAGGAGTCCAAAGAGAAGGTGGTGTCCCTCCTGCTGTCCCACCTTCCCCTGCTTCAGCCAGGCA ACACAGAGGCCAAGTCGGAGTACATGAGGCTACTGCAGAAAGTGCTGGCCTACTCAATCGAGAGCAATGC TTTCATCGAGGAGAGTCGCCAGCTGCTTTCCTATGCCCTCATCCACCCAGCCACCACACTGGAGGACCGC AACGCACTGGCCCTCTGGCTGAGCCACCTGGAAGAGCGGTTGGCTAGTGGCTTCCGCTCCCGGCCAGAGC CCTCCTACCATTCACGTCAAGGCTCAGATGAGTGGGGGGGCCCTGCAGAGCTAGGCCCTGGGGAGGCAGG GCCAGGCTGGCAGGACAAGCCACCCCGGGAAAATGGACACGTGCCCTTCCACCCATCCAGCTCAGTGCCG CCAGCCATCAACAGTATTGGGAGCAATGCAAACACAGGTCTCCCCTGCCAAATCCACCCTAGCCCACTGA AGCGCTCCATGTCACTCATCCCTACAAGCCCCCAGGTCCCTGGTGAGTGGCCGAGTCCAGAGGAGCTTGG GGCCCGGGCTGCTTTTACCACGCCCGATCACGCACCTCTCTCGCCCCAGAGCAGCGTGGCCTCCTCTGGC AGTGAGCAGACAGAGGAGCAGGGCTCCAGCCGGAACACCTTCCAGGAGGATGGCAGTGGCATGAAAGATG TGCCCTCATGGCTCAAGAGCCTCCGTTTGCACAAGTATGCAGCCCTCTTCTCACAGATGAGCTACGAGGA GATGATGACACTGACTGAGCAGCACCTGGAGTCTCAGAACGTCACCAAAGGTGCCCGCCACAAGATAGCC CTGAGCATCCAGAAGCTGCGTGAGAGACAGAGCGTCCTCAAGTCCCTAGAGAAGGATGTGCTGGAAGGCG GGAACCTACGAAACGCTCTGCAGGAGCTGCAGCAGATCATCATCACTCCCATCAAGGCCTACAGTGTCCT CCAGGCCACCGTGGCTGCCGCCACCACCACCCCTACTGCCAAGGATGGGGCCCCGGGGGAACCACCGCTG CCAGGTGCTGAGCCTCCCCTAGCCCACCCCGGCACAGACAAAGGCACCGAGGCCAAGGACCCTCCAGCTG TGGAGAACTACCCACCTCCACCAGCTCCAGCTCCCACTGATGGCAGTGAGCCTGCCCCGGCTCCCGTCGC CGACGGAGACATCCCCAGCCAGTTTACACGGGTGATGGGCAAAGTGTGCACCCAACTGCTGGTGTCCCGA CCAGACGAGGAGAACATCACCAGTTACCTCCAGCTCATCGAAAAGTGCCTGACTCATGAGGCTTTCACGG AGACGCAGAAGAAACGGCTGCTATCCTGGAAACAGCAAGTGCTGAAGCTCCTCCGGACATTCCCGCGCAA AGCCGCACTAGAGATGCAGAACTACCGGCAGCAGAAAGGCTGGGCATTCGGCTCCAACTCGCTCCCCATA GCTGGCTCTGTGGGGATGGGAGTGGCCCGGCGTACCCAGCGGCAGTTCCCAATGCCTCCCCGGGCCCTCC CACCCGGCCGGATGGGCCTCCTGAGCCCCTCGGGCATTGGGGGTGTCTCCCCTCGACATGCCCTCACCAG CCCCAGCCTTGGAGGCCAGGGCCGACAGAACCTGTGGTTTGCCAACCCTGGAGGCAGCAACAGCATGCCC AGTCAGAGCCGCAGCTCTGTGCAGCGCACCCACTCGCTCCCGGTCCACTCGTCACCCCAGGCCATTCTCA TGTTCCCTCCAGACTGCCCGGTTCCTGGGCCTGACCTGGAGATCAATCCCACTCTGGAGTCTCTGTGTCT GAGCATGACAGAACACGCCTTGGGTGGCCCGTCGAGGGATCTCTGCTGA
Translation (692 aa): MMFRDQVGILAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCNDIHLLESEANSAAIVSQ WQQESKEKVVSLLLSHLPLLQPGNTEAKSEYMRLLQKVLAYSIESNAFIEESRQLLSYALIHPATTLEDR NALALWLSHLEERLASGFRSRPEPSYHSRQGSDEWGGPAELGPGEAGPGWQDKPPRENGHVPFHPSSSVP PAINSIGSNANTGLPCQIHPSPLKRSMSLIPTSPQVPGEWPSPEELGARAAFTTPDHAPLSPQSSVASSG SEQTEEQGSSRNTFQEDGSGMKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHLESQNVTKGARHKIA LSIQKLRERQSVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATVAAATTTPTAKDGAPGEPPL PGAEPPLAHPGTDKGTEAKDPPAVENYPPPPAPAPTDGSEPAPAPVADGDIPSQFTRVMGKVCTQLLVSR PDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRTFPRKAALEMQNYRQQKGWAFGSNSLPI AGSVGMGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGVSPRHALTSPSLGGQGRQNLWFANPGGSNSMP SQSRSSVQRTHSLPVHSSPQAILMFPPDCPVPGPDLEINPTLESLCLSMTEHALGGPSRDLC
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