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Report for CCDS27723.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27723.1 Public Mus musculus 15 Pkdrej 23 108 98 CCDS HistoryNCBI Gene:18766Re-query CCDS DB by CCDS ID:27723.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27723.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000064370.5 ENSMUSP00000086352.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000064370.5Link to Ensembl Protein Viewer:ENSMUSP00000086352.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000064370Re-query CCDS DB by Protein ID:ENSMUSP00000086352
Original member Current member NCBI NM_011105.2 NP_035235.2 Accepted alive Link to Nucleotide Sequence:NM_011105.2Link to Protein Sequence:NP_035235.2Re-query CCDS DB by Nucleotide ID:NM_011105Re-query CCDS DB by Protein ID:NP_035235Link to BLAST:NP_035235.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035235.2 2126 Q9Z0T6 2126 100% 0 0

Chromosomal Locations for CCDS 27723.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 85815353 85821733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (6381 nt):
ATGTGGCCGGGCCCCGCGCTGCTGCTCCTGGGCCTGGGCCTGGGTCTAGGCAGCCAGCCGCCACCCACCG
GCCCTCGCGGGCTGCCGGGCGTGCTCAGGGGCGCCCCGGGGTTGGGGCAGGGCGCGGAGAGCAGCGTCCG
GGGCGGTGACACCGGGGGCCTGTCCCCGCGTGCAGCCCCGCGCCACGCCAGCCCTACGCCGCCCCGTAGG
TGTCCCTCGGGCGCAGCTGCACGCGTCCTCCTGAAAGTCAACTCTTCGGACCCCGCAGCCGCCAAGGCTA
ACGTGTCCTGCCAGACGGCCCCCTGTATCATGCAGCCAGTGAAGATCAACAGGAAGGACCAGAACGCTCC
CCTTATCCTGAGCAGAGACGAGGAAGCCACCCTCAATATCACTGTGCGTTGGTACTGTCCTGATGCCTTG
GTCATTCGCAAGAGCTGGGTGTACTTTTCGGTGGCCTCTGTGAACGACACCCCTGATTGGAACCGACCTG
TGCTCTTGCCGCAGGTGGCAGTGTCTAAGGGTTTCTCCCTCCACATCCCCAAATATGCCCTGCCTTACGG
GGTGTATGTGTTTAACTTTACGCTGTCCATCTTCAGGTGGGACCTCGCCTGGCCCACGGTGACAGGCTCG
GATATCATCTACATTTGGGTTAGAAAACGCCCCCTGAAGGCTGTTCTTCTTGGAGCCCCCAGAGTAACCG
TGAAGTTCTCCGATGAACTGATTCTGAATGGAAGCATGTCCTACGACCCAGAGGCAGACATCCCCACATG
GGGACTCCAGTTTTTTTGGTATTGTACCACAAATCCAAGATACTATAGTGGCAACTATGTATTAGTGATC
AACCAGGCTGTCTGCCACCCAGAGCAGGATTCACTGAACTGGCCTTGGGCAGTGGGCTCTGTACTAACCA
TTCCACCAAAAACTCTTAGGGGCAATGGTGTGTATTACTTCAGAATGGTGGTACAGAAGCAAAACAGAAC
TGCATTTTCTGATAAAACTGTACACGTGCTCCAGGGGCTTCAGCCCAAGGCACACATTTCCTGCATTGAA
AATTGTGGCCCCACGTTAGGTGTGTCAGATAGATTTTCTCTGTTTCTGAACTGCCCAAGTTGTGGCCGCC
AGGATTTGTATAGCTGGTCCATTTTGTCTCTAACGGGCCATGAAGTGATGTTTGACTGGGCAGGGCAAGC
AATCACCAGGAGGAATGGACCTTATTTGTCCATAAAAGCTTTTGCCTTTAGGAATTTTTTGGAAAATAGG
GTTTGGGTTTCCCTGATTCTGAAATCTTGGAGTGGTATGACCACGACCTTGAGACATCCCGTTGTCATTA
ACCATGGCCCTCGAGTTGGCAAATGCAAGATAAATCCAGCTAGTGGGATTTCCATGGTTACTAAATTTGC
TGTTGAATGTAGTGATTTTAAGGATGAGAACCTTCCCCTTAAGTATAAAATAATAGTATCTGAGTTGGAC
AGCATTGGCGCGATCAGTTCCGTAGAAGAGAATACACTGGGTTCCGTGGTGTATTCAGGGGCAGAGCCGA
TAACACCAGCCTTCTTTCTCCCTGTCGGTACGGTGACAGATGAGTACAATGTGAGGCTTTATGTTCAGGT
CTATGACTCCTTAGGGACATTTTCTCAAGTGACTTTGCAAGCGACTGTGACGGCACCTACTGTCAGGGAC
TCTTCAAAGGATGTTTTACAACAGCTGCTCAACGTCACCATGAAACCGACGTCACTGTTGTCTACCTTGC
TTCAAAAGCAGGACTGGCTACAGGCTGGCTACTTAACCTATGTGGTGATTTCTGTCTTGAATAACATAAA
AGGGGAGCAGGAACTTCAAGATGACAGAGCCCGTCTCCTGGAGCACCTCGTCAAACAGTCTCTCACGTTT
GCTATGAACACAGCGGATGAGATCGGTCAGTCGGTGATGGTGATTACCAAATTAACCCAGAAAGCCTCTG
ACTTGAGTCAAGCGGATTTAGAGGCCACCTCGTTCCGGCTTAGGCAAGCAAGCCAAGACCTACAAGAATA
CCAGCACAGACACAAGCACCTTCAGCAGGTTGAAGTTGTGGGCACTGGCATCCTAACCAGTCTGTCTAAC
CTTCTTAAGCTGATTAATCCCTACTATACGTTACAAGATCCTTTGTTTGTAGTCGAATCACTATCAGACA
CAATACTGGCTAACAAGGTTCCGGGGAGCAAGACCACTGCTCTGAGGACCAGTAACTTTAACATGTATGT
GGAGAAAGTTGAAAACTGGAATGTTTTTAAGGCCTTCAGAAATGATTCACTCTGTCCAAACTGCCTCCGT
GCGACACTGAACGCAAGCACGGTCCCCAGGCTACCCGCAAAGGCTCCGATTTCTATGATGTTTTGTGAGT
TCGCAGACGACCCCTTTCCTTGGTTGACTTACCCGGAAAACATTTCTGTAGATGTGGTTGGGTTCAGGAT
GACTGGAGTCGCAGATAACAATAAGGTCATAGAGATCACACCCGACATAGCAGAAGTGTACCTGGTCAGA
AAAGATCTGACCCCTTCGAGTTTTAACCTTACGGTGGGACCCGGCATTAAAAGCGATGGGTTCTCAAAGG
TGACAACGGGTGGAATTAGCTTTGAGGTAGACAGCAGGTGGACTGGGGAGCTACTCATTCACATTGTCAC
AAATGTGACAGTGTTGTTTGAGGCCTTGGTATATGAAGGCTGTCAGCTCACGCCCACCAATCTGATGGCC
ACTTTCCTTGTTCCTAATGACATCCCTCCCATTGTCAAGTGGAGTGGCCTGTTTGACCCAACCTGTTCAG
TCAAGGAGGCCCGCGTGGTTTGTCTGTCATCATCCCTGCTTCGAAGCATAGCTCAGCGCAGATTTTCATT
CAAGTATAACATATCCATGGTCCTGCAGGCATCGCGTTTTGTCCTGAAGCCCACTAACAAGCTAGTGAGA
ATTGCTCTCTTTATGGTTCACTGTTTGGACATGTATGGGATCCAGAGTGATTGGCAACAAAGTACCTGCG
TGCTGGGTGAGAAGACCACGTGGAAAACAGTACACTGTGTCTGTAGGAATGGAAGGCGGAGCCGGCGGCA
GCTGACTTCTGTGAAGCTGACCTACCATCATCTGCACACCCACTTTGTGACTGCTAAGGTAATTGTGGTC
CCTAACCCCGTGGATCTGAGGCTAGCGATCATTAGTAACCTTACCCAAAACCCTGCGACTTTCCTGGCCG
TGCTTTTCATTATGATCTTGTATGCAATTCTGGCTTTCTGGGCCTTGCACAGGGATGTGATAGATCTGTA
TTTTCGGGACAATGTGGTAATACTGACTGATAATGATCCTTTTGATACCCTATGCTATCTAGTAACCATC
TTTACTGGGAGTCGCTGGGGGTCTGGAACCAGAGCCAATGTTTTTATCCAGCTTATGGGAACGGAGGGTA
CCAGTGATGTTCACTGTTTAAGCCATCCATATTTTAAAACCCTATACCGAGGAAGTATCAATACTTTCCT
CCTGACAACAAAAAATGACTTGGGGGATATCCATTCCATCCGAGTGTGGCATGACAATTCGGGCGAAGCA
CCTAGCTGGTACCTAAGTCGAATCAAAGTAGAAAATCTCTTCAACAAGCGCATTTGGCTTTTTGTGTGCC
GGAGGTGGCTCTCTGTGGACACCACTTTGGATGCAACGTTTTCTGTCACCAACCCGGATGAGCCTCTGAA
AAGGACAGACTTCTTCATGATTGATGTGAGGGATAAGCTTCGGAAGAACCACATGTGGATCTCCATTTTC
ACGGAAATTGTCCCCAAACCATTCAACAGGCTCCAGAGGCTGTCCTGCTGCTTGGCCATGCTGCTAAGCT
CTCTTGTTTGCAATATCATGTTTTTTAACTTGAACCAAAAGGAGAAAATTGAGTCCAGACACATGCACAT
TATCAGGTCAATGCTGATAGGCATCGAGAGCGTCGTAATCACAATCCCCGTGCAATTACTGATAACTTTT
TTCTTCACCTATTCCCAGAAGAATCTTAAAATGAATCTAGACAAAGTGGCACCCCAGAAGCACCCCCTGA
TGTCAGAGGAAGGTCTGTCCTGGAAAGAGCGATTGCACAAATGGCATGAATATGAAATGAAGGCTCTCCC
CAGGAGAGCTGCCGTGTCCACCTCTGCTCCCGAGGAAAAGGAAGCCTTTGAAACCTCACAGAAGCATGAG
AAAGCAGACACCCAAATGTCCAATAAGAACAGCAGTAACAATAACCAAGAAGCCAGTGAAGGTGTCCCTC
CGAAAGCTTTCTCTTCCCAACCGCATACTACTGAGTCTGTTCAAAAGAAGACCCAGATTATCCTGCCCAG
GTGGTGTGTTTACATAGCCTGGTTTTTGGTGTTTGCCACTTCCGGTATATCGTCATTCTTTATTGTATTT
TACGGCGTGACTTACGGCTATGCCAAGTCAATAGAGTGGCTCTTTGCGTCGTTCTGTTCCTTCTGTCAGT
CTGTGTTCCTCGTACAACCATGCAATATTCTCCTGAGGTCAGGCACCAGGAGCTACAAGCCCAAGTACTG
TAAGAACCTCTCGTGGTCCAGCAAGTACCATTACTCAGAAATCAGGCTGCAGGGGTTGACGATGACACAG
GAGGAGATGGAGCAGCTTCATGAGGACATCGCCTACGTCCGAAGCTTGAGCATGTACCAGCCCATCACTG
AGGACAAAATCCAGATCCTCAGGCGGGAGAACAGGATCCGGAGGAGGTCCTTCTTGTTCCTGAGCTACCT
CGTGACTCACTTCATATTCCTGACCCTTCTCCTGTTGCTCATTTTCTCACTGCGCCACAACGACAGCTTC
TACTATAACCAGTTTATTCGCCATCGGTTCTCCGTGGATCTCGCCACTGTGATGAAGCTGGGAGATATCT
ACACCTGGCTCCACGGCGTGTTCCTCCCTTTGTTACACAATGACCCAAACCCAACATTCCTTCCGGACAG
CTCTTCTAAAATCCTTGGCCTTCCGCTTGTGAGGCAAGTGAGGGCCAGACCTAGCAACAAGACGTGTCTG
TTGGCCAAGAAGTTTGTACAGAGCAGCGTTGCAGGGGAAATCCATTGTCACCCACAGTACGGCATTGACC
CAGAAGACACACAACACTATTCCAGTGTCTGGAGTAAGGCTGGCAAGCAGTCAACAGACAAAGCTAGCCA
TGGGTTTACTTATAAGCCTCCGGGGAAAAGATGGGTGTATCATTCCTATGGAGTACTAAACACCTATGGA
TCTGGAGGGTATGTGTTCTACTTCTTTCCAGGACAGCAGATGTTTAATTCTACAGTGAGGCTCAAGGAAC
TCGAGGGAAAGAATTGGCTGGATGAGTTGACATGGGCCGTGATTGTGGAACTGACCACTCTGAATCCAGA
CACCAGTCTGATGTGTAGCATTTCGGTTGTATTCGAAGTCTCTCCCTTAGGGGTTGTCAACTCTAGCCTT
TCTGTGTACTCCTTCTCGCTGGCTGACTTCAACAGAAAAACCTCGTCAGAAATCTACCTCTACGCCGCCA
TTCTTATTTTCTTTTGTGCCTATGTTGTGGACGAGGGCTACATCATCAGGCAAGAGAGGGCTTCCTACAT
AAGGAGTGTGTACAACCTGCTCAACTTCTCTCTCAAGTGCATGTTCGCTCTCCTGATAGTGCTTTTCTTC
TGGAAGTACTTCCTGGCCACCAAAATGGTCCAGCTTTACCTTGCTGACCCCGAAGCCTTCATTCCCTTCC
ATGCCGTTTCTCGGGTTGACCACTTCATGAGAATCATCTTGGCTTTCCTGTTGTTTCTGACCATACTGAA
GACACTCAGATATTCCAGGTTCTTCTATAATGTGCGCCTGGCTCAGAAGGCCATCCAGGCTGCCCTTCCT
GGCATCTGCCACACGGCTTTGGTGGTGTCTATATATTCCTTCATGTACGTAGCTTTTGGGTACTTGGTGT
TCGGTCAGCATGAATGGAATTACAGCAATATGATTCACGCCACCCAAACCATCTTCTCCTACTGCGTGTC
AGCCTTTCAGAACACAGAATTTTCCGGCAACAAGGTTCTCGGGGTCCTGTTTCTGTCGTCTTTCATGTTG
GTGATGATCTGTATCTTCATCAACTTGTTTCAGGCAGTGATTCTGTCTGCCTATGATGAGATGAAGCAGC
CTGTGTACGAGGAGCCGTCTGATGAGGCCGAGGCTGTAACCTATCTGTGCAACAGGCTAAAATCTGGGTT
TGACTTTCTCACCACCCGATCTAGAGACAAAGACCAATCCAACTTCTTCGTCGACATGCTCTATGGGCAG
CCGGAGAAGAATACTCGCCGGTTCCTGGGACTGAAGGCCAGAAATATCAACGGGAAGAAAATGATTTACC
TTGTTGTCTGA

Translation (2126 aa):
MWPGPALLLLGLGLGLGSQPPPTGPRGLPGVLRGAPGLGQGAESSVRGGDTGGLSPRAAPRHASPTPPRR
CPSGAAARVLLKVNSSDPAAAKANVSCQTAPCIMQPVKINRKDQNAPLILSRDEEATLNITVRWYCPDAL
VIRKSWVYFSVASVNDTPDWNRPVLLPQVAVSKGFSLHIPKYALPYGVYVFNFTLSIFRWDLAWPTVTGS
DIIYIWVRKRPLKAVLLGAPRVTVKFSDELILNGSMSYDPEADIPTWGLQFFWYCTTNPRYYSGNYVLVI
NQAVCHPEQDSLNWPWAVGSVLTIPPKTLRGNGVYYFRMVVQKQNRTAFSDKTVHVLQGLQPKAHISCIE
NCGPTLGVSDRFSLFLNCPSCGRQDLYSWSILSLTGHEVMFDWAGQAITRRNGPYLSIKAFAFRNFLENR
VWVSLILKSWSGMTTTLRHPVVINHGPRVGKCKINPASGISMVTKFAVECSDFKDENLPLKYKIIVSELD
SIGAISSVEENTLGSVVYSGAEPITPAFFLPVGTVTDEYNVRLYVQVYDSLGTFSQVTLQATVTAPTVRD
SSKDVLQQLLNVTMKPTSLLSTLLQKQDWLQAGYLTYVVISVLNNIKGEQELQDDRARLLEHLVKQSLTF
AMNTADEIGQSVMVITKLTQKASDLSQADLEATSFRLRQASQDLQEYQHRHKHLQQVEVVGTGILTSLSN
LLKLINPYYTLQDPLFVVESLSDTILANKVPGSKTTALRTSNFNMYVEKVENWNVFKAFRNDSLCPNCLR
ATLNASTVPRLPAKAPISMMFCEFADDPFPWLTYPENISVDVVGFRMTGVADNNKVIEITPDIAEVYLVR
KDLTPSSFNLTVGPGIKSDGFSKVTTGGISFEVDSRWTGELLIHIVTNVTVLFEALVYEGCQLTPTNLMA
TFLVPNDIPPIVKWSGLFDPTCSVKEARVVCLSSSLLRSIAQRRFSFKYNISMVLQASRFVLKPTNKLVR
IALFMVHCLDMYGIQSDWQQSTCVLGEKTTWKTVHCVCRNGRRSRRQLTSVKLTYHHLHTHFVTAKVIVV
PNPVDLRLAIISNLTQNPATFLAVLFIMILYAILAFWALHRDVIDLYFRDNVVILTDNDPFDTLCYLVTI
FTGSRWGSGTRANVFIQLMGTEGTSDVHCLSHPYFKTLYRGSINTFLLTTKNDLGDIHSIRVWHDNSGEA
PSWYLSRIKVENLFNKRIWLFVCRRWLSVDTTLDATFSVTNPDEPLKRTDFFMIDVRDKLRKNHMWISIF
TEIVPKPFNRLQRLSCCLAMLLSSLVCNIMFFNLNQKEKIESRHMHIIRSMLIGIESVVITIPVQLLITF
FFTYSQKNLKMNLDKVAPQKHPLMSEEGLSWKERLHKWHEYEMKALPRRAAVSTSAPEEKEAFETSQKHE
KADTQMSNKNSSNNNQEASEGVPPKAFSSQPHTTESVQKKTQIILPRWCVYIAWFLVFATSGISSFFIVF
YGVTYGYAKSIEWLFASFCSFCQSVFLVQPCNILLRSGTRSYKPKYCKNLSWSSKYHYSEIRLQGLTMTQ
EEMEQLHEDIAYVRSLSMYQPITEDKIQILRRENRIRRRSFLFLSYLVTHFIFLTLLLLLIFSLRHNDSF
YYNQFIRHRFSVDLATVMKLGDIYTWLHGVFLPLLHNDPNPTFLPDSSSKILGLPLVRQVRARPSNKTCL
LAKKFVQSSVAGEIHCHPQYGIDPEDTQHYSSVWSKAGKQSTDKASHGFTYKPPGKRWVYHSYGVLNTYG
SGGYVFYFFPGQQMFNSTVRLKELEGKNWLDELTWAVIVELTTLNPDTSLMCSISVVFEVSPLGVVNSSL
SVYSFSLADFNRKTSSEIYLYAAILIFFCAYVVDEGYIIRQERASYIRSVYNLLNFSLKCMFALLIVLFF
WKYFLATKMVQLYLADPEAFIPFHAVSRVDHFMRIILAFLLFLTILKTLRYSRFFYNVRLAQKAIQAALP
GICHTALVVSIYSFMYVAFGYLVFGQHEWNYSNMIHATQTIFSYCVSAFQNTEFSGNKVLGVLFLSSFML
VMICIFINLFQAVILSAYDEMKQPVYEEPSDEAEAVTYLCNRLKSGFDFLTTRSRDKDQSNFFVDMLYGQ
PEKNTRRFLGLKARNINGKKMIYLVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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