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Report for CCDS9611.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9611.1 Public Homo sapiens 14 FITM1 24 110 108 CCDS HistoryNCBI Gene:161247Re-query CCDS DB by CCDS ID:9611.1Re-query CCDS DB by GeneID:161247See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 9611.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000267426.6 ENSP00000267426.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000267426.6Link to Ensembl Protein Viewer:ENSP00000267426.5Re-query CCDS DB by Nucleotide ID:ENST00000267426Re-query CCDS DB by Protein ID:ENSP00000267426
Original member Current member NCBI NM_203402.3 NP_981947.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_203402.3Link to Protein Sequence:NP_981947.1Re-query CCDS DB by Nucleotide ID:NM_203402Re-query CCDS DB by Protein ID:NP_981947Link to BLAST:NP_981947.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_981947.1 292 A5D6W6-1 292 100% 0 0

Chromosomal Locations for CCDS 9611.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24131564 24131829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24132211 24132823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGGAGCGGGGGCCGGTGGTGGGGGCAGGACTGGGGGCCGGGGCCCGAATCCAGGCACTGCTGGGCTGCC
TGCTCAAGGTGCTGCTCTGGGTGGCCTCTGCCTTGCTGTACTTTGGAAGCGAACAGGCCGCCCGCCTTCT
GGGCAGCCCCTGCTTACGGCGCCTCTACCATGCCTGGCTGGCAGCAGTGGTCATCTTTGGGCCGCTTCTG
CAGTTCCATGTCAACCCTCGGACTATCTTCGCCAGCCACGGCAACTTCTTCAACATAAAATTTGTGAATT
CAGCCTGGGGCTGGACATGCACTTTCTTAGGGGGCTTTGTGTTGCTGGTGGTGTTCCTGGCTACACGGCG
CGTGGCAGTAACTGCCAGACACCTGAGCCGACTGGTAGTAGGGGCAGCCGTGTGGCGGGGAGCCGGCCGG
GCCTTCCTGCTCATCGAGGACCTGACTGGCTCCTGCTTCGAGCCACTGCCCCAGGGTCTGCTGCTCCACG
AGCTGCCTGACCGCCGCAGCTGCCTGGCAGCCGGCCACCAGTGGCGAGGCTACACCGTCTCCTCCCACAC
CTTCCTGCTCACCTTTTGCTGCCTGCTCATGGCAGAGGAAGCAGCTGTGTTCGCCAAGTACCTGGCCCAT
GGGCTTCCTGCCGGCGCCCCACTGCGCCTTGTCTTCCTGCTGAACGTGCTGCTGCTGGGCCTCTGGAACT
TCTTGCTGCTCTGTACCGTCATCTATTTCCACCAGTACACTCACAAGGTGGTGGGCGCCGCAGTGGGCAC
CTTTGCCTGGTACCTCACCTATGGCAGCTGGTATCATCAGCCCTGGTCTCCAGGGAGCCCAGGCCATGGG
CTCTTCCCCCGTCCCCACTCCAGCCGCAAGCATAACTGA

Translation (292 aa):
MERGPVVGAGLGAGARIQALLGCLLKVLLWVASALLYFGSEQAARLLGSPCLRRLYHAWLAAVVIFGPLL
QFHVNPRTIFASHGNFFNIKFVNSAWGWTCTFLGGFVLLVVFLATRRVAVTARHLSRLVVGAAVWRGAGR
AFLLIEDLTGSCFEPLPQGLLLHELPDRRSCLAAGHQWRGYTVSSHTFLLTFCCLLMAEEAAVFAKYLAH
GLPAGAPLRLVFLLNVLLLGLWNFLLLCTVIYFHQYTHKVVGAAVGTFAWYLTYGSWYHQPWSPGSPGHG
LFPRPHSSRKHN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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